Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Accr5g01483 ATGGCTAGAGACACAAGCTTGGATGGGGAAATTATGACATCTGATACAACAGGATCATCAGGAAGTCATCCTCCAACTGAAGAACCTGAAAAAATCCAAACAAACACAGATAGGCAGCGACAAGATTTAAAGAAGAGCAAGGCCAAAGAAGAAAGCCATAAAACAGTTCCATTCTACAGGCTTTTCTCATATGCAGATTCTTTCGATCGTCTTCTCATGTTTGTTGGGACAATAGCAGCTGTTGCTAATGGAATGACAATACCTCTATTGATGATAATTTTTGGAGATGTCATTGATGTTTTTGGAGGAACTAGTGACACCAAAGAAATGGTTCATAATGTCTCCAAGGCCTCTCTTGACTTTGTATACCTGGCTATGGGTACCTTTGTAGCTTCATTTTTGCAGGTGACTTGCTGGATGGTCACTGGAGAGAGACAGTCTGCAAGGATAAGAAGCTTATACCTTGAGGCAATTCTGAGACAAGAAGTAAGCTTCTTTGATAGGGAAACCAATAGTGGAGAGGTTATTACAAGGATGTCAGGTGACGCAGTTCTCATTCAAGATGCCATGGGAGAGAAAGTAGGAAAGTTCATACAGCATGTGGCAACATTTGTGGGAGGTGTGGTTATATCATTTTTTAAGGGCTGGCTTCTCACCCTTGTCTTGCTAACTTTTCTTCCACTTTTTCTCCTCTCTGGTGCCTTGATGAGCTTCGTCGCTGCAAAAATGGCATCTCGTGGACAAGCAGCCTATTCCACAGCAGCAAATGTGGTGGAACAGACAATCAGTTCCATTCGAACTGTTGCATCATTCACAGGGGAGAAGCAAGCTATAAGCCAGTATAATAAATCTTTAATAAAAGCTTACCATGCTGGTGTGGTAGAGGGAGCAGCTTCTGGTTGTGGCTTCGGTTCAGCTCGTATGTTTATATTCTCCAGTTACGCTTTGGCCGCATGGTATGGAGGGAAGATGGTACTAGAGAAAGGATATACAGGAGGACAAGTCATGAGTATCTTTTTTGCCATATCTACTTGCTCCTTGTCTCTAGGGCAGTCATCTCCAAGTTTGATTGCATTTGCTGCGGGACAAGCTGCAGCTTTTAAAATGTTTGAAACAATCAAGAGGAAACCAGAAATTGATGCTTATGACACTTCTGGTCAGAAGTTGGATGACCTTAATGGTGATATAGAACTAAAGGAGGTTTGCTTTAGTTATCCTACAAGACCAAATGAATTAATATTCAATGGATTTTCTCTATCAATACCAAGTGGCACTACTACTGCCTTGGTAGGGCAAAGTGGGAGTGGGAAATCAACTGTTGTCAGTTTGATAGAAAGGTTTTATGATCCACAAGCTGGTGAAGTTCTCATTGACAATATCAATCTCAGAGAGTTCAACTTAAAATGGATTAGAGGGAAAATTGGCCTTGTCAGCCAGGAACCTATTCTCTTTTCTTGTAGCATTAAAGAGAATATTGCTTATGGCAGAGATGGTGCAACCGATGAAGAAATTAGAGCTGCAGCAGAACTTGCTAATGCCACTAAATTCATTGATAAATTTCCTCAGGGACTAGACACAATGGTAGGCGAGCATGGAACTCAGCTCTCTGGGGGTCAAAAGCAGAGAATTGCAATAGCAAGAGCAACGTTGAAAGACCCAAAAATCTTACTTCTTGATGAAGCTACCAGTGCCTTGGATGCTGAATCTGAGAGAGTAGTGCAGGAGGCATTGGACAGAATTAGGATAAGCAGGACAACCGTAATTGTAGCCCACCGTTTAAGTACTATAAGGAATGCAGATTTAATAGCTGTTATTCATCAAGGAAAGGTAGTAGAAAAAGGCTCACATGAAGAGCTCACAGAGGATCCAGATGGAGCCTATAGCCAGCTCATTAGATTGCAAGAAACTAAAAGAGAACAAGAACTAAATAGTGCAAATTACAAGGATAGGTCTGAAAGCTTTCAGGACTCTGAAAGACAATCAAGTCAAAGGTTTTCTTTCCTTCGGTCAACAAGCCAAGGATCATCTGGAAAAGGAAATAGCGGCCGTCACTCTTTCTCAAGTCTCACTTCTGCAGCAGCAGTTGATACTGATGCATCACATAACCCAGCCAAAGTCTCACTTCTCCGCCTTGCTCATCTTAACAAGCCTGAATTCCCAGTGTTACTATTAGGTACTTTGGCAGCAGCACTAAATGGAGCAGTATTACCTATTTTGGGGCTCCTTCTATCTGGCATGATACACACTTTCTTTGAGCCTGCAGATAAACTCCGTAAAGATTCAAAATTCTGGGCTTGTGTGTTTATTGCACTTGCTGTGGTAGCCTTCTTAGTGAATTCCATAAGGTCCTACTTTTTTGGTGTGGCTGGATGTAAGTTGATAAAAAGGATCCGTCTATTGTGTTTTGAGAAAATAATTCACATGGAAATAGGTTGGTTTGACAAAGCTGAGAATTCAAGTGGAGCACTTGGAGCAAGACTTGCTACTGATGCCGCTTCAATTCGAGCCGTGGTTGGGGATGCACTAGGCTTACTGATTCAAGACATGTCCACTGCAATCTCTGCCTTAGTAATTGGCTTTGAGACAAGCTGGCGTCTTTCATTGATCATTGTTGCTATGTTACCCTTACTGGTATGGGTAAATTCTCAGGTCTATACTAAATCCATGCGAGGATTCAGCGCAGATGCAAAGAAACAATATGAGGAAGCAAGTCAAGTTGCAAATGATGCAGTACGGAGTATCAGGACAGTGGCTGCTTTCTGTGCTGAAGAGAAGGTGATGGAGTTATACCATAAGAAATGTGAAGGACCAATAAAAGCAGGTACAAGGCAAGGATTAATCAGTGGAACTGGTTTAGGTGTATCTTTCCTTGTCTTGTATTCTGTCTATGGATGCAGCTTTTATGCTGGTGCTCGACTTGTTCAAGATGGCAAAATATCATTCTCACATGTTTTTCGCGTCTTCTTTGTTCTCACTATGGCAGCTGTAGCACTATCTCAGTCTGGTTTAATGGCCCCAAGTGCAAGCAAAGCAACAGCTTCTGTTGCTTCCATATTTGATATTCTAGATCATAAATCAAAAATAGATCCTAGTGATGCCTCTGGATTGACTTTGCAAGATTTGAAGGGAGAAGTTGAATTTCGTCATGTTGCTTTCAAATATCCCACCAGGCCTGATGTTCAAATATTTAGAGATCTTTGCTTGACCATTCGTTCAGAAAAGACTATTGCATTAGTGGGAGAAAGTGGGAGTGGAAAGTCAACTGTGATCTCATTGCTACAAAGATTCTATGACCCAAATTCAGGTCATATAACATTAGATGGAATCGAAATTCAAAAGCTACAGATTAAATGGTTAAGACAACAGATGGGTTTAGTAAGTCAGGAGCCTATGTTGTTTAATGACACCATCCGAGCTAATATTGCATATGGAAAAGAAGGAGATGCAACAGAAGCAGAAATTATATCTGCTGCAGAACTAGCAAATGCTCACAAGTTCATTAGCAGTTTATATCAGGGGTATGACACAGTTGTGGGGGAACGAGGAGTTCAATTATCTGGGGGACAAAAGCAAAGAGTGGCAATTGCAAGAGCCATAGTGAAGAACCCTAAGATATTACTATTAGATGAAGCCACTAGTGCTCTTGATGCTGAATCTGAAAAAGTGGTTCAAGATGCACTAGATCGTGTCATAGTGGACAGAACCACAATTGTTGTGGCTCATAGGTTATCCACAATTAAGAATGCTGATTTAATTGCAGTGGTTCAAAATGGGGTCATTGCAGAGAAGGGAAACCATAAAACTCTGCTCAAAAAGAGTGGAGCCTATGCTTCCTTACTTGCAGTGCACAAAAGTACTCATTCAACATAA 3870 0.4127 MARDTSLDGEIMTSDTTGSSGSHPPTEEPEKIQTNTDRQRQDLKKSKAKEESHKTVPFYRLFSYADSFDRLLMFVGTIAAVANGMTIPLLMIIFGDVIDVFGGTSDTKEMVHNVSKASLDFVYLAMGTFVASFLQVTCWMVTGERQSARIRSLYLEAILRQEVSFFDRETNSGEVITRMSGDAVLIQDAMGEKVGKFIQHVATFVGGVVISFFKGWLLTLVLLTFLPLFLLSGALMSFVAAKMASRGQAAYSTAANVVEQTISSIRTVASFTGEKQAISQYNKSLIKAYHAGVVEGAASGCGFGSARMFIFSSYALAAWYGGKMVLEKGYTGGQVMSIFFAISTCSLSLGQSSPSLIAFAAGQAAAFKMFETIKRKPEIDAYDTSGQKLDDLNGDIELKEVCFSYPTRPNELIFNGFSLSIPSGTTTALVGQSGSGKSTVVSLIERFYDPQAGEVLIDNINLREFNLKWIRGKIGLVSQEPILFSCSIKENIAYGRDGATDEEIRAAAELANATKFIDKFPQGLDTMVGEHGTQLSGGQKQRIAIARATLKDPKILLLDEATSALDAESERVVQEALDRIRISRTTVIVAHRLSTIRNADLIAVIHQGKVVEKGSHEELTEDPDGAYSQLIRLQETKREQELNSANYKDRSESFQDSERQSSQRFSFLRSTSQGSSGKGNSGRHSFSSLTSAAAVDTDASHNPAKVSLLRLAHLNKPEFPVLLLGTLAAALNGAVLPILGLLLSGMIHTFFEPADKLRKDSKFWACVFIALAVVAFLVNSIRSYFFGVAGCKLIKRIRLLCFEKIIHMEIGWFDKAENSSGALGARLATDAASIRAVVGDALGLLIQDMSTAISALVIGFETSWRLSLIIVAMLPLLVWVNSQVYTKSMRGFSADAKKQYEEASQVANDAVRSIRTVAAFCAEEKVMELYHKKCEGPIKAGTRQGLISGTGLGVSFLVLYSVYGCSFYAGARLVQDGKISFSHVFRVFFVLTMAAVALSQSGLMAPSASKATASVASIFDILDHKSKIDPSDASGLTLQDLKGEVEFRHVAFKYPTRPDVQIFRDLCLTIRSEKTIALVGESGSGKSTVISLLQRFYDPNSGHITLDGIEIQKLQIKWLRQQMGLVSQEPMLFNDTIRANIAYGKEGDATEAEIISAAELANAHKFISSLYQGYDTVVGERGVQLSGGQKQRVAIARAIVKNPKILLLDEATSALDAESEKVVQDALDRVIVDRTTIVVAHRLSTIKNADLIAVVQNGVIAEKGNHKTLLKKSGAYASLLAVHKSTHST 1289
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Accr5g01483 1289 MobiDBLite consensus disorder prediction 638 685 - -
Accr5g01483 1289 FunFam ABC transporter B family member 1 702 1011 - -
Accr5g01483 1289 ProSitePatterns ABC transporters family signature. 535 549 IPR017871 GO:0005524|GO:0016887
Accr5g01483 1289 ProSiteProfiles ABC transporter integral membrane type-1 fused domain profile. 723 1010 IPR011527 GO:0005524|GO:0016020|GO:0055085|GO:0140359
Accr5g01483 1289 MobiDBLite consensus disorder prediction 1 49 - -
Accr5g01483 1289 Pfam ABC transporter transmembrane region 73 344 IPR011527 GO:0005524|GO:0016020|GO:0055085|GO:0140359
Accr5g01483 1289 Pfam ABC transporter transmembrane region 722 995 IPR011527 GO:0005524|GO:0016020|GO:0055085|GO:0140359
Accr5g01483 1289 MobiDBLite consensus disorder prediction 30 49 - -
Accr5g01483 1289 SUPERFAMILY ABC transporter transmembrane region 54 380 IPR036640 GO:0005524|GO:0016020
Accr5g01483 1289 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 388 634 IPR027417 -
Accr5g01483 1289 PANTHER ABC TRANSPORTER B FAMILY 36 774 IPR039421 -
Accr5g01483 1289 Coils Coil 630 650 - -
Accr5g01483 1289 Gene3D ABC transporter type 1, transmembrane domain 678 1033 IPR036640 GO:0005524|GO:0016020
Accr5g01483 1289 FunFam ABC transporter B family member 1 1035 1284 - -
Accr5g01483 1289 MobiDBLite consensus disorder prediction 638 657 - -
Accr5g01483 1289 CDD ABC_MTABC3_MDL1_MDL2 1045 1279 - -
Accr5g01483 1289 Pfam ABC transporter 415 563 IPR003439 GO:0005524
Accr5g01483 1289 ProSiteProfiles ABC transporter integral membrane type-1 fused domain profile. 74 361 IPR011527 GO:0005524|GO:0016020|GO:0055085|GO:0140359
Accr5g01483 1289 SMART AAA_5 423 615 IPR003593 GO:0016887
Accr5g01483 1289 SMART AAA_5 1072 1265 IPR003593 GO:0016887
Accr5g01483 1289 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 1036 1281 IPR027417 -
Accr5g01483 1289 CDD ABC_MTABC3_MDL1_MDL2 396 634 - -
Accr5g01483 1289 MobiDBLite consensus disorder prediction 658 685 - -
Accr5g01483 1289 FunFam ABC transporter B family member 1 386 635 - -
Accr5g01483 1289 CDD ABC_6TM_Pgp_ABCB1_D1_like 73 357 - -
Accr5g01483 1289 ProSitePatterns ABC transporters family signature. 1185 1199 IPR017871 GO:0005524|GO:0016887
Accr5g01483 1289 Gene3D - 386 635 IPR027417 -
Accr5g01483 1289 ProSiteProfiles ATP-binding cassette, ABC transporter-type domain profile. 1045 1282 IPR003439 GO:0005524
Accr5g01483 1289 MobiDBLite consensus disorder prediction 9 29 - -
Accr5g01483 1289 Gene3D ABC transporter type 1, transmembrane domain 60 651 IPR036640 GO:0005524|GO:0016020
Accr5g01483 1289 CDD ABC_6TM_Pgp_ABCB1_D2_like 714 1028 - -
Accr5g01483 1289 ProSiteProfiles ATP-binding cassette, ABC transporter-type domain profile. 396 632 IPR003439 GO:0005524
Accr5g01483 1289 FunFam ABC transporter B family member 9 60 393 - -
Accr5g01483 1289 SUPERFAMILY ABC transporter transmembrane region 710 1025 IPR036640 GO:0005524|GO:0016020
Accr5g01483 1289 Gene3D - 1035 1288 IPR027417 -
Accr5g01483 1289 Pfam ABC transporter 1065 1213 IPR003439 GO:0005524
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Accr5g01483 Accr-Chr5 40964605 40969624 Dispersed/Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Accr5g01483 58 640 Calmodulin-binding Proteins AT2G36910 38.737 1.40e-116 393
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Accr5g01483 K05658 - gmx:100777713 1788.08