Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Accr5g01475 ATGAGTTGGGGATCGGATAGTAAGACCGAGGCCATGAAGAAGAAGAAAAGTAATGGGTCTGTTGGATCCATTTTCATGCATGCCGATTCCCAAGATTGGTTTTTGATGGTTCTTGGTGTGTTGGGGTCTTTCGGCGACGGTTTCACGGGGCCTACTGTGTTGTTTATTAGTAGCCGCTTGATGAACAATATTGGAGGGGCCTCATCTCAAATGGACGTATCTGCTTTTGTTCAGAACTCTAACGAGAACGCGGTGGCTTTATTATATCTGGCCTGCGTGTCATTTTTAGCATGCTTCCTCGAGGGATATTGTTGGACGAGAACAGGAGAGAGACAAGCAGCGAGAATGAGATCCAGGTATTTGAGAGCAATGCTAAGACAAGAAGTTGCATACTTTGATTTGGAAGTTACAAGCACGTCCGAGGTCATCACCAGCGTCTCTAACGACAGCATCGTAATTCAAGATTTTCTCAGCGAAAAGGTTCCAAACTTGCTGACGAATCTCTCTATGTTCGTTGCGAGCTACGTTGTGGCCTTTTCAATGTTCTGGAGATTGGCTATTGTGGCCTTACCTTTCGTGGTTCTTCTAGTAATCCCTGGTTTAATGTACGGAAGGACATTAACGGGGTTGGCTAGCAAGATCAGGGACGAGTACAACCAGGCCGGTGCAATCGCAGAGCAAGCAATATCTTCCATCAGAACCGTCCATTCCTTTGTCGGCGAAAGCAAAACCATATCTGCTTTCTCCTCTGCTTTACAGGGTTCAGTCAAGCTGGGTCTAAAACAGGGCCTAGCTAAAGGCTTAGCCATAGGAAGCAACAGTATTGTGTTCGTCATATGGTCCTTCATTTGCTATTATGGGAGCAGACTCGTCATGTACCACGGCGCTCAAGGTGGCACCGTCTTCGCCGTCGGAGCAGCCATGGCTCTGGGTGGATTATCGTTGGGAGCTGGTTTATCCAACGTGAAGTACCTGTCGGAAGCGAGTTCAGCAGGGGAGAGAATAATTGAGGTGATAAAGAGAATTCCCAAGATTGACTCAGAGAACATGGAAGGTGAGATTCTGGAGAGAATTCATGGGGAAGTGGAGTTCGATCGAGTGGAGTTCGCATACCCATCGAGGCCAGACAGCATTATTCTCAGGGATTTTAGCATGAAGATTCCGGCGGGGAAGACGGTGGCGCTGGTGGGTGAGAGTGGGTCAGGGAAGTCCACGGTGATCTCACTGTTGCAGAGATTTTACGATCCAATGGGAGGAGAAATACGTGTGGACGGGGTGGGAATTAAGAGGGTGCAGCTAAAGTGGATGAGGTCGAAGATGGGACTGGTGAGCCAAGAGCCGGCTCTGTTCGCCACAAGCATAAAAGAGAACATACTGTTTGGGAAAGAGGATGCTAGTGAGGATGAGATTGTGGAGGCTGCCAAGGCTTCCAATGCTCATGATTTTATCTCTCAGTTGCCTCTGGGATACGATACCCAGGTGGGTGAACGAGGCGTTCAAATGTCAGGAGGACAAAAACAGAGGATTGCTATTGCGCGGGCACTGATAAAAAAACCACGAATCCTCCTTCTCGATGAAGCAACAAGTGCTCTAGACAATGAATCCGAACGAGTTGTCCAAGAAGCTCTGGACAACGCAGCTGTTGGACGCACCACCACCATCGTCGCTCACCGCCTATCCACCATTCGGAACGCCGACGTTATCGCCGTCCTTCAAAACGGTAGCCTCATAGAAATGGGATCGCATGATGAGCTCATCGAAAACGAAAATGGGCTTTACACCTCTCTGGTTCGTCTCCATCAAACAGAGAAATGTAGAACGATTCAAGAGGATACCGTCGGCGTCACTTCTACCTCTTCAACCACCGGATCAGATAGGGACATGAACAACACAAGCTGCCGAAGATTATGTCTCGTGCCTCGATCTAACTCTGCAAATTCAATAGGACAGGTTCGAGTTTCAAGTGCCAATGAAGAAACCAATGTGGCTACAGAAGAAAAGAAGCTCCCTGTTCCCTCGTTTCGGAGGTTGCTTGCCCTGAATCTCCCGGAATGGAAGCAGGCAACTTTAGGGTGTTTCAGTGCTTTTCTGTTCGGTGCAATTTACCCATTGTTCTCATTCTCAATGGGGTCAATGGTTTCTACTTTTTTCCTAACAGACCACGACGAGATTAAAAAGAAGATGAAGGTTTATGCGTTTTGCTACCTGGGTTTAATGGCCTCGTCATTGATTACTAGCATAAGCCAGCACTATAGTTTCGCTTACATGGGTGAATACTTAACCAAAAGGATAAGAGAGAAAACGTTTTCAAAGATACTCACATTTGAAGTTGGTTGGTTCGATCGACCCGAAAATACAAGTGGTGCGGTTTGCTCTAGACTCGCCAAAGATGCCAATGTGGTGAGGTCTCTAATAGGAGATAGGATGTCTCTGTTGACACAAACTTTCTCCACTGTGATAATTGCTTGCACAATGAGCCTAGTAATTTCGTGGAGGTTCGCCATTGTTATTATAGCTGTTCAGCCCTTAATTATAATCAGCTACTATACTAGGAGGGTCCTACTCAAGAGCATGACCAACAAGGCCACTGAGGCCCAAAATGAATGCAGCAAGCTAGCCGCCGAAGCTGTTTCCAACCTTCGTATAGTTACAGCCTTCTCTTCCCAGGACAGGATCATCAAAATGCTCGAAAAAGCCCAAGAAGGGCCCAGACAAGAGAGCATTAGACAGTCTTGGTTTGCTGGTATTGGGCTTGCTTTCTCACAGTGTATCACGGCCTGTACTTGGGCCTTAGACTTTTGGTATGGTGCGAAGCTGATGTCCACTGGTCTCATCAAAGCCGAAGCACTTTTTCAAACATTCATGGTACTAATGGGTACGAGCCGCGTTATTGCAGATGCCGGAAGCATGACTTCCGACATTGCCAAAGGCGCAGATTCTTTGGGCTCTCTCTTCGCAGTTCTCGACCGCCACACAAAAATGGACCCCGATAACCAAAACGGGTATAAGCCGGATAAACTCACGGGTCTAATAGAACTTCATGATATCCATTTCGCCTACCCGTCCCGACCCAACGACATGATATTTCGGGGGTTTTCTACGAGAATCGAAGCGGGGAAATCAACGGCATTGGTGGGTCAGAGTGGGTGTGGGAAGTCAACCATCATAGGATTAATCGAGAGATTCTACGATCCATTAGAAGGGACAGTGAGTATAGACGGAAGAGACATAAAGTCATACCACCTTAGGACCTTAAGAGAGCACATGGCACTAGTGAGCCAAGAACCAACATTATTTGCAGGGAGCATAAAGGAGAATATAGCATACGGAGCTAAGGACAACGTTGACGAAGCCGAGATTGTTGAGGCAGCTAAAGTAGCGAATGCTCATGAATTCATATCAAGCTTGAGCGACGGATATGAGGCATGTTGTGGGGAGAGAGGAGTACAACTATCAGGTGGTCAGAAGCAGAGAATAGCAATAGCGAGAGCGATAGTGAAGAAGCCGGAGGTGTTGCTGCTAGATGAAGCGACTAGTGCTTTAGATAACCAGTCGGAGAGGGCGGTGCAAGAGGCTTTGGAGCGTGTTATGGTGGGGAAGACAAGCGTGGTGGTGGCTCATAGGTTGACCACCATTCACAAGTGTGATGTGATTGCTGTGTTAGAGAAGGGGAAGGTGGTGGAGAAAGGGACCCACTCGTCCTTGCTGGCTAAGGGGCCAGGTGGTGCTTATTATGATCTGGTTAGTCTCCAAAGGAGGCATTCCAGTTCCAAATTAACCAACCCAACAGCTGGCAAATTTGTGATATGCATTTTTGGGGGGTGA 3825 0.4761 MSWGSDSKTEAMKKKKSNGSVGSIFMHADSQDWFLMVLGVLGSFGDGFTGPTVLFISSRLMNNIGGASSQMDVSAFVQNSNENAVALLYLACVSFLACFLEGYCWTRTGERQAARMRSRYLRAMLRQEVAYFDLEVTSTSEVITSVSNDSIVIQDFLSEKVPNLLTNLSMFVASYVVAFSMFWRLAIVALPFVVLLVIPGLMYGRTLTGLASKIRDEYNQAGAIAEQAISSIRTVHSFVGESKTISAFSSALQGSVKLGLKQGLAKGLAIGSNSIVFVIWSFICYYGSRLVMYHGAQGGTVFAVGAAMALGGLSLGAGLSNVKYLSEASSAGERIIEVIKRIPKIDSENMEGEILERIHGEVEFDRVEFAYPSRPDSIILRDFSMKIPAGKTVALVGESGSGKSTVISLLQRFYDPMGGEIRVDGVGIKRVQLKWMRSKMGLVSQEPALFATSIKENILFGKEDASEDEIVEAAKASNAHDFISQLPLGYDTQVGERGVQMSGGQKQRIAIARALIKKPRILLLDEATSALDNESERVVQEALDNAAVGRTTTIVAHRLSTIRNADVIAVLQNGSLIEMGSHDELIENENGLYTSLVRLHQTEKCRTIQEDTVGVTSTSSTTGSDRDMNNTSCRRLCLVPRSNSANSIGQVRVSSANEETNVATEEKKLPVPSFRRLLALNLPEWKQATLGCFSAFLFGAIYPLFSFSMGSMVSTFFLTDHDEIKKKMKVYAFCYLGLMASSLITSISQHYSFAYMGEYLTKRIREKTFSKILTFEVGWFDRPENTSGAVCSRLAKDANVVRSLIGDRMSLLTQTFSTVIIACTMSLVISWRFAIVIIAVQPLIIISYYTRRVLLKSMTNKATEAQNECSKLAAEAVSNLRIVTAFSSQDRIIKMLEKAQEGPRQESIRQSWFAGIGLAFSQCITACTWALDFWYGAKLMSTGLIKAEALFQTFMVLMGTSRVIADAGSMTSDIAKGADSLGSLFAVLDRHTKMDPDNQNGYKPDKLTGLIELHDIHFAYPSRPNDMIFRGFSTRIEAGKSTALVGQSGCGKSTIIGLIERFYDPLEGTVSIDGRDIKSYHLRTLREHMALVSQEPTLFAGSIKENIAYGAKDNVDEAEIVEAAKVANAHEFISSLSDGYEACCGERGVQLSGGQKQRIAIARAIVKKPEVLLLDEATSALDNQSERAVQEALERVMVGKTSVVVAHRLTTIHKCDVIAVLEKGKVVEKGTHSSLLAKGPGGAYYDLVSLQRRHSSSKLTNPTAGKFVICIFGG 1274
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Accr5g01475 1274 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 354 599 IPR027417 -
Accr5g01475 1274 ProSiteProfiles ABC transporter integral membrane type-1 fused domain profile. 690 976 IPR011527 GO:0005524|GO:0016020|GO:0055085|GO:0140359
Accr5g01475 1274 Gene3D ABC transporter type 1, transmembrane domain 24 605 IPR036640 GO:0005524|GO:0016020
Accr5g01475 1274 Pfam ABC transporter 1031 1179 IPR003439 GO:0005524
Accr5g01475 1274 PANTHER ABC TRANSPORTER B FAMILY 6 701 IPR039421 -
Accr5g01475 1274 SUPERFAMILY ABC transporter transmembrane region 30 346 IPR036640 GO:0005524|GO:0016020
Accr5g01475 1274 Pfam ABC transporter transmembrane region 690 958 IPR011527 GO:0005524|GO:0016020|GO:0055085|GO:0140359
Accr5g01475 1274 Pfam ABC transporter transmembrane region 37 304 IPR011527 GO:0005524|GO:0016020|GO:0055085|GO:0140359
Accr5g01475 1274 CDD ABC_MTABC3_MDL1_MDL2 362 599 - -
Accr5g01475 1274 FunFam Putative ABC transporter B family member 8 654 999 - -
Accr5g01475 1274 SUPERFAMILY ABC transporter transmembrane region 668 990 IPR036640 GO:0005524|GO:0016020
Accr5g01475 1274 ProSitePatterns ABC transporters family signature. 501 515 IPR017871 GO:0005524|GO:0016887
Accr5g01475 1274 FunFam ABC transporter B family member 1 23 359 - -
Accr5g01475 1274 Gene3D ABC transporter type 1, transmembrane domain 643 999 IPR036640 GO:0005524|GO:0016020
Accr5g01475 1274 ProSiteProfiles ATP-binding cassette, ABC transporter-type domain profile. 1011 1248 IPR003439 GO:0005524
Accr5g01475 1274 Pfam ABC transporter 380 529 IPR003439 GO:0005524
Accr5g01475 1274 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 1000 1251 IPR027417 -
Accr5g01475 1274 Gene3D - 1001 1261 IPR027417 -
Accr5g01475 1274 ProSiteProfiles ABC transporter integral membrane type-1 fused domain profile. 37 327 IPR011527 GO:0005524|GO:0016020|GO:0055085|GO:0140359
Accr5g01475 1274 ProSitePatterns ABC transporters family signature. 1151 1165 IPR017871 GO:0005524|GO:0016887
Accr5g01475 1274 ProSiteProfiles ATP-binding cassette, ABC transporter-type domain profile. 362 598 IPR003439 GO:0005524
Accr5g01475 1274 CDD ABC_6TM_Pgp_ABCB1_D1_like 36 335 - -
Accr5g01475 1274 SMART AAA_5 389 592 IPR003593 GO:0016887
Accr5g01475 1274 SMART AAA_5 1038 1231 IPR003593 GO:0016887
Accr5g01475 1274 Coils Coil 855 875 - -
Accr5g01475 1274 CDD ABC_6TM_Pgp_ABCB1_D2_like 678 994 - -
Accr5g01475 1274 Gene3D - 352 601 IPR027417 -
Accr5g01475 1274 CDD ABC_MTABC3_MDL1_MDL2 1011 1251 - -
Accr5g01475 1274 FunFam ABC transporter B family member 4 1001 1258 - -
Accr5g01475 1274 FunFam ABC transporter B family member 4 352 607 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Accr5g01475 Accr-Chr5 40878413 40884285 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Accr5g01475 690 1261 Calmodulin-binding Proteins AT2G36910 37.847 1.85e-115 389
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Accr5g01475 K05658 - cave:132181353 1811.96