Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Accr5g01471 ATGGCAAATTATTTGCAGAATCCCCGGAATTGCTTGTTGTTACTGCTCTGTAGTTTGGCGGTGCTATGGCGTTTTGCTGCCTCGCAGGCTGAAGACGACTTGCAATGCCTTAAAGGCATTAAAAGCTCTTTCAGTGATCCTCAGGGAAAGCTTGCTTCATGGCGGTTCGATAACAGCACCCCCGGTTTCATATGCACCTTCGTCGGCGTTACGTGCTGGAACCCCCAGGAGAATCGGGTCCTCAATCTGGAGCTCCGGGATATGAAACTCTCAGGACAGGTGCCGGAATCGTTGAAGTATTGCGGTAGGAGTCTGCAGAAACTGGATCTTGGGTCTAACGACGTTTCCGGTACGATCCCTTCTCAGATATGCGATTGGTTGCCATTTCTAGTGACACTGGACTTTTCCGATAATCATCTCTCTGGGCAAATACCTCCTACTCTTGGGAATTGCACTTACTTGAATACCCTAATTCTTTCCAATAACCAACTTTCCGGTGCTGTTCCATTCGAAATTGGGAGTTTGGCCAGGCTAAGGACATTCTCTGTTGCTAATAATCATCTTACTGGTACGATTCCGTCATATTTAAGTGGTTATGATAAGGAAGATTTTGCTGGAAATAGTGGACTTTGTGGAGGTCCCCTTGGGTCCAAGTGTGGTGGATTGAGTAAGAAGAATCTTGCTATTATCATCGCTGCTGGGATCTTTGGTGCTGCTGCTTCTTTATTATTGGCTTTTGGATTGTGGTGGTGGTATCATTTGCGGTTGGCTAGGAAGAAGAGAGGATTTGGGGTTGGAGCGAGTGATGATTGGGCTGCGAGGTTGAGGGGTCACAGACTTGTTCAAGTTATATTGTTTCAGAAACCCCTTGTGAAGGTTAAACTAGGAGATTTGATGGGGGCGACCAATAATTTCAATTCTATAAATATCATCATGTCTTCAAGAACAGGGACTACCTATAAAGCAGACCTTCCTGATGGATCAATACTTGCAGTTAAGCGGCTTAACACCTGTAAGATTGGAGAAAAGCAGTTTCGCAAGGAGATGCGTAGGCTAGGACAAGTCAGGCATCCGAACTTGGCACCCCTTTTAGGCTTCTGTGTGGTTGAAGAGGAAATACTTCTGGTTTATAAGCACATGTCAAATGGTACTCTGTCTTCGTTGTTGCATAAAGATGGTACTGGATCGGAATTGGATTGGCCAATGAGATTCAGGATAGGCTTTGGCGCCGCCAGGGGTCTCGCTTATCTGCATCATGGGTGTCATCCTCCAATAAGACACCAAAACATCTGTTCCAATGTGATAGTTGTTGATGAAGATTTCGATGCTCGATTAATGGACTTCGGACTTGCTAGGCTCATGACATCTGATTCAAATGATAGTAGCTTTGTGAGTGGGGACTTAGGCGAGCTTGGCTATGTAGCTCCCGAATATCCAAGCACCCTTGTTGCTTCTCTAAAAGGGGATGTATATGGATTTGGAGTTGTGCTTTTGGAGTTGGTTACTGGTCGCAAACCTCTTGAAGTTGGCAATGGAGAGGAAGAGTTTAAGGGTAACTTAGTTGATTGGGTCAATATGTTTTCCAGTTCTGGTCGAGCTAAGGATTGCATTGATAGGGCCGTATGTGGAAGAGGGCATGACGAGGAGATTCTGCAGGTTCTGAAAATTGCATGTAATTGTGTGGTTTCTCGCCCAAAGGACAGGTGGTCCATGTACCAGGTTTATCATTCCTTGAAGAGTTTGTCCAAAGACTACAACTTCTCTGAACATGATGATGAATTTCCATTGATTTTTAACAAGCCGGAGTCAGCATAA 1815 0.4507 MANYLQNPRNCLLLLLCSLAVLWRFAASQAEDDLQCLKGIKSSFSDPQGKLASWRFDNSTPGFICTFVGVTCWNPQENRVLNLELRDMKLSGQVPESLKYCGRSLQKLDLGSNDVSGTIPSQICDWLPFLVTLDFSDNHLSGQIPPTLGNCTYLNTLILSNNQLSGAVPFEIGSLARLRTFSVANNHLTGTIPSYLSGYDKEDFAGNSGLCGGPLGSKCGGLSKKNLAIIIAAGIFGAAASLLLAFGLWWWYHLRLARKKRGFGVGASDDWAARLRGHRLVQVILFQKPLVKVKLGDLMGATNNFNSINIIMSSRTGTTYKADLPDGSILAVKRLNTCKIGEKQFRKEMRRLGQVRHPNLAPLLGFCVVEEEILLVYKHMSNGTLSSLLHKDGTGSELDWPMRFRIGFGAARGLAYLHHGCHPPIRHQNICSNVIVVDEDFDARLMDFGLARLMTSDSNDSSFVSGDLGELGYVAPEYPSTLVASLKGDVYGFGVVLLELVTGRKPLEVGNGEEEFKGNLVDWVNMFSSSGRAKDCIDRAVCGRGHDEEILQVLKIACNCVVSRPKDRWSMYQVYHSLKSLSKDYNFSEHDDEFPLIFNKPESA 604
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Accr5g01471 604 FunFam Inactive LRR receptor-like serine/threonine-protein kinase BIR2 380 600 - -
Accr5g01471 604 Gene3D Transferase(Phosphotransferase) domain 1 380 600 - -
Accr5g01471 604 FunFam Inactive LRR receptor-like serine/threonine-protein kinase BIR2 266 379 - -
Accr5g01471 604 CDD STKc_IRAK 311 581 - -
Accr5g01471 604 ProSiteProfiles Protein kinase domain profile. 305 579 IPR000719 GO:0004672|GO:0005524|GO:0006468
Accr5g01471 604 FunFam Inactive LRR receptor-like serine/threonine-protein kinase BIR2 30 220 - -
Accr5g01471 604 Gene3D Ribonuclease Inhibitor 30 221 IPR032675 -
Accr5g01471 604 SUPERFAMILY Protein kinase-like (PK-like) 284 578 IPR011009 -
Accr5g01471 604 SUPERFAMILY L domain-like 30 201 - -
Accr5g01471 604 Pfam Leucine rich repeat N-terminal domain 30 73 IPR013210 -
Accr5g01471 604 Pfam Protein kinase domain 316 576 IPR000719 GO:0004672|GO:0005524|GO:0006468
Accr5g01471 604 PANTHER LEUCINE-RICH REPEAT RECEPTOR PROTEIN KINASE EMS1 79 196 - -
Accr5g01471 604 Gene3D Phosphorylase Kinase; domain 1 265 379 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Accr5g01471 Accr-Chr5 40778177 40779991 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Accr5g01471 11 603 Receptor kinase-like Gene Family AT3G28450 63.272 0.0 776
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-Xa Accr5g01471 Pkinase 8.9e-28 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Accr5g01471 - - qsa:O6P43_009034 899.427