LGRPv2

Gene search

Sequence information

Select	Gene	Cds	Cds_length	GC_content	Pep	Pep_length
	Accr5g01465	ATGGACAAGCCACTTGGTCACAATGCCGAGAACAACAACTCTGATTCTCTCGTTTGCTCCCTCCAAGATCCCAGCTTTAGCAAGATGAACAATAATAGCAACGTAGAGTCTCAAAGCAGCATCGAATCCAACAGTTATGATGAAAGTCACAAGAGCAGTTCAAGCTGTGTGAGTAATTACTCTAACAGTTGTGATGCCAATGATTCAGGTCTTAGGAGCTTTTTCCCTTGCAAGCCTCACAAGGGCAACGATATTCGATGGGATTCAATACAGTTCGTGAAAGCCAAGTACGGAGATTTGGGTTTGGGACATTTCAGGCTGTTGAAGAAGCTGGGTTTTGGGGACATTGGAAGTGTGTATCTGGCTGAGCTTAAGGGTAAAGGTTGTCTGTTCGCAATGAAGGTTATGGATAAGGAAAAGTTGACTGCAAGGAAAAAAATGTCCAGAGTCCAAACAGAGAGGGACATTTTGAGTTCCTTGGACCACCCTTTTCTTCCCACCCTTTATTCTCATTTCGAAACAGAGAAATTCTCTTGCTTGCTTATGGAGTTTTGTAATGGTGGTGATCTTCACGTCCTCCGCCAGCGCCAGCCAGGCAAGTATTTCACAGAACAAGCTGCAAGGTTTTATGCTTCTGAAATTCTTCTTGCTCTTGAGTATCTCCACATGATGGGGGTGATATACAGGGACTTGAAGCCTGAGAATGTTCTGGTTCGTGAGGATGGTCATATTATGCTCTCTGATTTTGATCTATCATTAAGATGTTGTGTGAGACCTACCCTAGTCCAGTCCAACGGAGAATCGTCTAGTCAAGTTTCTTCTTCCTACTGTGTTGTACCATCTTCATGCATAGACCCATCTTGCAAGTTACCTGTTTGTGTGGAGCCTTCTTGCTTGCAATTGAAGCCTTCTTGCTTCAAACCCCATGTTTTGAGCTCCAAAAAGACCAGACCAAAGACTGTTAAACAGAATTCAACAAGCCCAGATTCATATCCTATGCTTATTGCTGAGCCAACCAATGTTCGTTCTATGTCATTTGTGGGGACTCATGAATATTTAGCCCCAGAGATTATGAGAGGCGATGGTCATGGTAGTGCAGTGGATTGGTGGACATTTGGTATTTTCTTGTACGAGTTATTGCATGGGAAGACACCATTTAAGGGCAGTACTGGAAACAGAGAGACACTATTTAACATTGTTGGGCAGCCTCTTAGGTTTCCTGAGGGATCAAACATAAGTTTTGCTGCTAAGGATTTGATAAGAGGGTTGCTTGTGAAAGACCCAAAGAAGAGGCTTGGGTTTCAGAGAGGTGCCTCTGAGATTAAACAACATGCTTTCTTTCAAAGTGTTAATTGGGCTCTTGTTCGTAGTAAACAGCCACCACTGATCCCAAAACCACTTGATCTTGCAGTTTTGAATGAGACTTTGAAGATGCCAGTGCCCTCTGATAATTCCAACACATCTTCAGGTCCTTACTTGGAGTTTCAATTTTTTTGA	1497	0.4302	MDKPLGHNAENNNSDSLVCSLQDPSFSKMNNNSNVESQSSIESNSYDESHKSSSSCVSNYSNSCDANDSGLRSFFPCKPHKGNDIRWDSIQFVKAKYGDLGLGHFRLLKKLGFGDIGSVYLAELKGKGCLFAMKVMDKEKLTARKKMSRVQTERDILSSLDHPFLPTLYSHFETEKFSCLLMEFCNGGDLHVLRQRQPGKYFTEQAARFYASEILLALEYLHMMGVIYRDLKPENVLVREDGHIMLSDFDLSLRCCVRPTLVQSNGESSSQVSSSYCVVPSSCIDPSCKLPVCVEPSCLQLKPSCFKPHVLSSKKTRPKTVKQNSTSPDSYPMLIAEPTNVRSMSFVGTHEYLAPEIMRGDGHGSAVDWWTFGIFLYELLHGKTPFKGSTGNRETLFNIVGQPLRFPEGSNISFAAKDLIRGLLVKDPKKRLGFQRGASEIKQHAFFQSVNWALVRSKQPPLIPKPLDLAVLNETLKMPVPSDNSNTSSGPYLEFQFF	498

Annotation information

Select	Seq ID	Length	Analysis	Description	Start	End	IPR	GO
	Accr5g01465	498	SUPERFAMILY	Protein kinase-like (PK-like)	83	480	IPR011009	-
	Accr5g01465	498	FunFam	serine/threonine-protein kinase D6PK-like	189	256	-	-
	Accr5g01465	498	FunFam	Serine/threonine-protein kinase D6PK-like	103	188	-	-
	Accr5g01465	498	SMART	serkin_6	105	447	IPR000719	GO:0004672\|GO:0005524\|GO:0006468
	Accr5g01465	498	Gene3D	Transferase(Phosphotransferase) domain 1	185	254	-	-
	Accr5g01465	498	CDD	STKc_phototropin_like	104	470	-	-
	Accr5g01465	498	FunFam	serine/threonine-protein kinase D6PK-like	341	465	-	-
	Accr5g01465	498	ProSiteProfiles	Protein kinase domain profile.	105	447	IPR000719	GO:0004672\|GO:0005524\|GO:0006468
	Accr5g01465	498	ProSitePatterns	Serine/Threonine protein kinases active-site signature.	226	238	IPR008271	GO:0004672\|GO:0006468
	Accr5g01465	498	MobiDBLite	consensus disorder prediction	1	46	-	-
	Accr5g01465	498	Gene3D	Phosphorylase Kinase; domain 1	104	184	-	-
	Accr5g01465	498	PANTHER	FLIPPASE KINASE 1-RELATED	27	468	-	-
	Accr5g01465	498	Pfam	Protein kinase domain	106	254	IPR000719	GO:0004672\|GO:0005524\|GO:0006468
	Accr5g01465	498	Pfam	Protein kinase domain	343	447	IPR000719	GO:0004672\|GO:0005524\|GO:0006468
	Accr5g01465	498	MobiDBLite	consensus disorder prediction	7	46	-	-
	Accr5g01465	498	Gene3D	Transferase(Phosphotransferase) domain 1	342	465	-	-

Duplication type information

Select	Gene	Chromosome	Start	End	Duplicated_type
	Accr5g01465	Accr-Chr5	40758328	40759902	Dispersed/Wgd

Functional genes information

Select	Gene	Gene_start	Gene_end	Function	Ath_gene	Identity(%)	E-value	Score
	Accr5g01465	61	498	AGC Kinase Gene Family	AT5G40030	72.809	0.0	647

Transcription factors information

Select	Regulatory Factors	Family	Gene	Hmm_acc	Hmm_name	E_value	Clan
	PK	AGC_RSK-2	Accr5g01465		Pkinase	3.7e-39	CL0016

Pathway information

Select	Query	KO	Definition	Second KO	KEGG Genes ID	GHOSTX Score
	Accr5g01465	K08286		-	qsu:112027816	697.582