Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Accr5g01464 ATGGAGATTATGGCGAAGATGTGGGGACAACTAGGCTCAATCACGGCCACCGTCATGTTGTTCTACGCCATGTTTGATAGGTTCTTCCCTCCTCCTCTTCGTCAGTACCTCAGAACCTACACCCAAAAACTCACCTCCCTCATCAATCCCTATATCTCCATCAAATTCTCCGAGTTCGAAGGCGAACGAATGAAGCGCAGCGAAGCTTACACCGCCATCCAAACATATCTCAGTGCCAACTCTTCCGAACGAAGCTCCAGGCTCAAAGCCGAAGTCGTCAAGGACAGCCAGACCCCGCTTGTTCTCAGCATGGACGACAACGAAGAGATCACCGACGAGTTTCAGGGCGTGAAGCTATGGTGGTGCTCTCGTCACCTAGAAGTCAAGAACCAGTCCTTCTCCTTTTATCCTGCCTCCGACGAGAAGCGTTTCTACAAGCTCACCTTCCACCGGCGTCATCGGCACGTCGTCATCCGTTCTTATATCAAACACGTACTGGACGAAGGAAAGGCCATCGCAACCCGAAACCGGCAACTGAAGCTGTACACAAACAACCCGAGCAGTGACTGGTACGGTTGGAAGAGAACCAAGTGGAGCCATGTCGTTTTTGAGCATCCTGCGAGTTTTGATACTCTCGCTTTGGACTCTAAGATGAAAGAAGATATTTTAAAGGACCTTGTTAAGTTTCAAAAAGGAAAGGAGTACTATGCCAAGGTCGGAAAGGCTTGGAAGAGAGGATATTTACTTTATGGTCCACCGGGAACAGGCAAGTCTACTATGATCGCCGCCATGGCAAATTTCTTGAACTACGATATCTATGACCTTGAACTGACGGCTGTGAAGGAGAACGTCGAGCTTAGAAAGCTGTTGATAGAAACTTCTAGTAAGTCGATCGTAGTGATCGAAGACATTGATTGCTCTCTTGATCTTACCGGGAAGAGGAAGAAGAAGAAGAAAGACAAAGAGGAGGGATCCAAAGACGCAGTTAAGAAGGCGTTAGATGAAGAGGAAGATAAGGAGAGTAAGGTGACACTTTCAGGACTGTTGAATGTAATTGATGGAATTTGGTCGGCTTGTGGAGGAGAGAGAGTGATTGTGTTCACAACTAATTATGTGGACAAGCTTGATCCTGCTCTTATAAGGAGAGGACGCATGGATAAACATATTGAATTGTCCTACTGTTGCTACGAAGCGTTCAAGGTTCTTGCGAGGAATTACTTGGATGTTGAGAGCCACCGTTTGTTTCCGAGAATTGAGGAATTGTTTCAGGAGACGCAGATGACTCCTGCTGATGTTGCTGATAATCTAATGCCGAAATCAGTGGAGGAAGAGGCGGAGACTTGCTTGGAGAGGTTGATCGAAGCACTTGAAACAGCCAAGCTGGAAGCGAAGAAGAAGGCAGAAGAAGAAGAAGCAAAGAAGAAGGCAGAGGAGGAAGAATCAAAGAAGAAGAAGGCAGAGGAAGAAGTGAAGGAGAATGGAGAGTTGGCCAAGAAAGAGGAGGAAAATAATAAAAAATCTGGTGCAGGAGTGAAAGAAAATGGTTTCCTTTCATCTGGAAATTAA 1566 0.4636 MEIMAKMWGQLGSITATVMLFYAMFDRFFPPPLRQYLRTYTQKLTSLINPYISIKFSEFEGERMKRSEAYTAIQTYLSANSSERSSRLKAEVVKDSQTPLVLSMDDNEEITDEFQGVKLWWCSRHLEVKNQSFSFYPASDEKRFYKLTFHRRHRHVVIRSYIKHVLDEGKAIATRNRQLKLYTNNPSSDWYGWKRTKWSHVVFEHPASFDTLALDSKMKEDILKDLVKFQKGKEYYAKVGKAWKRGYLLYGPPGTGKSTMIAAMANFLNYDIYDLELTAVKENVELRKLLIETSSKSIVVIEDIDCSLDLTGKRKKKKKDKEEGSKDAVKKALDEEEDKESKVTLSGLLNVIDGIWSACGGERVIVFTTNYVDKLDPALIRRGRMDKHIELSYCCYEAFKVLARNYLDVESHRLFPRIEELFQETQMTPADVADNLMPKSVEEEAETCLERLIEALETAKLEAKKKAEEEEAKKKAEEEESKKKKAEEEVKENGELAKKEEENNKKSGAGVKENGFLSSGN 521
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Accr5g01464 521 MobiDBLite consensus disorder prediction 463 521 - -
Accr5g01464 521 Gene3D - 390 454 - -
Accr5g01464 521 MobiDBLite consensus disorder prediction 463 508 - -
Accr5g01464 521 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 101 445 IPR027417 -
Accr5g01464 521 Coils Coil 319 339 - -
Accr5g01464 521 Coils Coil 442 504 - -
Accr5g01464 521 CDD RecA-like_BCS1 222 391 - -
Accr5g01464 521 FunFam AAA-ATPase ASD, mitochondrial 199 389 - -
Accr5g01464 521 SMART AAA_5 243 395 IPR003593 GO:0016887
Accr5g01464 521 Pfam ATPase family associated with various cellular activities (AAA) 248 392 IPR003959 GO:0005524|GO:0016887
Accr5g01464 521 Pfam Domain associated at C-terminal with AAA 29 123 IPR025753 -
Accr5g01464 521 Gene3D - 197 389 IPR027417 -
Accr5g01464 521 ProSitePatterns AAA-protein family signature. 363 382 IPR003960 GO:0005524|GO:0016887
Accr5g01464 521 PANTHER BCS1 AAA-TYPE ATPASE 11 469 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Accr5g01464 Accr-Chr5 40751639 40753204 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Accr5g01464 222 391 Calmodulin-binding Proteins AT3G56690 26.404 6.18e-11 63.2
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Accr5g01464 - - gmx:100787917 696.041