Gene search


Sequence information


Select Gene Cds Cds_length GC_content Pep Pep_length
Accr5g01461 ATGCCAATTAAAGGAGGTTCCAACAAGGCCTGCGCTGCCTGCAAATATCAGAGAAGAAAATGTTCAAAGGACTGCGCTCTGGCTCCTTATTTTCCTTGCGACGAGCCAAAAAAATTCATTAACGCTCACCGTTTGTTTGGAGTCGCCAACATCAAGAAGATCCTGGATCAGGTAGAGCCTAGACAGAGAGATGAAGCCATGACATCGATTATCTTTGAATCTAACATACGAGAACAGTTTCCTGTTATGGGATGTTTAGGAGTCATATGTAACTATAATAAGCTTGTACTTGCTGCCATGGAAGAGCTGAGGTATTTGCATCTAAGACTTTCCGTTTACAGGCAACAACATCATTGTCAAATTTCCCCAAAAATTTCTACTTCCATGTCAATGGAATTTATGCCTGTTAGTACAGATCCCTTGCCCATGTCAAACCACATTCAATATGAATCAACAAACTACTTACAATATGATAACGATGGATCAGTTATTAGATTTGATGGAGGTAGCGGCGGATTAACAAACCACTCACAAAATGATAACGATGGAGTTACTAGATTTGATGGAGGTAGCGGCGGATCAACAAACCACTCACAAAATGATAACGATGGAGTTACTAGATTTGATGGAGGTAGCGGCGGATCAACAAACCACTTACAATATGATAACGGTGGAGTTACTAGATTTGATGGAGGTAGCGGCGGATCAACAAACCACTTACAATATGATAACGGTGGAGTTACTAGATTTGATGGAGGTAGCGGCGGATCAACAAACCACTTACAATATGATAACGGTGGAGTTACTAGATTTGATGGAGGTAGCGGCGGATCAACAAACCACTTACAATATGATAACGGTGGAGTTACTAGATTTGATGGAGGTAGCGGCGGATCAACAAACCACTTACAATATGATAAGTGTACAGTTACTGGATTTGATGGAGGTAGCGGCGGATCAACAAACCACTTACAATATGATAACGGTGGAGTTACTAGATTTGATGGAGGTAGCGGCGGATCAACAAACCACTTACAATATGATAACGGTGGAGTTACTAGATTTGATAGAGGTAGTGGCGGATCAACAAACCACTTACAATATGATAACAATGGAGTTATTAGATTTGATGGAGCTAGCGGCGGATCAACAAACCACTTACAAAATGAAAATGATAACGATGGAGTTACTAGATTTGATGGGAGTAGCGGCAGATCAATAAACCACTTACAATATGATAACGATGGAGTTACTAGATTTGATGGAGGTAGCGGTGGATCAATTAGATTTGATAGAGGTAATGGCGGAAATGAAGGATTTGGTTTTCAACCATCCATCAACCACATGACTGCACAATCGACTCATTTCACACCCAACCATGAACCAGAAATAGTGGGCACAATTGATTGTGACGATTTAAATCCTTATAATGAAATGTTTTGA 1443 0.4047 MPIKGGSNKACAACKYQRRKCSKDCALAPYFPCDEPKKFINAHRLFGVANIKKILDQVEPRQRDEAMTSIIFESNIREQFPVMGCLGVICNYNKLVLAAMEELRYLHLRLSVYRQQHHCQISPKISTSMSMEFMPVSTDPLPMSNHIQYESTNYLQYDNDGSVIRFDGGSGGLTNHSQNDNDGVTRFDGGSGGSTNHSQNDNDGVTRFDGGSGGSTNHLQYDNGGVTRFDGGSGGSTNHLQYDNGGVTRFDGGSGGSTNHLQYDNGGVTRFDGGSGGSTNHLQYDNGGVTRFDGGSGGSTNHLQYDKCTVTGFDGGSGGSTNHLQYDNGGVTRFDGGSGGSTNHLQYDNGGVTRFDRGSGGSTNHLQYDNNGVIRFDGASGGSTNHLQNENDNDGVTRFDGSSGRSINHLQYDNDGVTRFDGGSGGSIRFDRGNGGNEGFGFQPSINHMTAQSTHFTPNHEPEIVGTIDCDDLNPYNEMF 480
       

Annotation information


Select Seq ID Length Analysis Description Start End IPR GO
Accr5g01461 480 MobiDBLite consensus disorder prediction 335 349 - -
Accr5g01461 480 ProSiteProfiles LOB domain profile. 9 110 IPR004883 -
Accr5g01461 480 MobiDBLite consensus disorder prediction 168 285 - -
Accr5g01461 480 MobiDBLite consensus disorder prediction 230 244 - -
Accr5g01461 480 MobiDBLite consensus disorder prediction 171 223 - -
Accr5g01461 480 Pfam Lateral organ boundaries (LOB) domain 10 104 IPR004883 -
Accr5g01461 480 PANTHER LOB DOMAIN-CONTAINING PROTEIN 4-RELATED 9 137 - -
Accr5g01461 480 MobiDBLite consensus disorder prediction 332 364 - -
Accr5g01461 480 MobiDBLite consensus disorder prediction 251 265 - -
       

Duplication type information


Select Gene Chromosome Start End Duplicated_type
Accr5g01461 Accr-Chr5 40694864 40696306 Dispersed/Tandem
       

Functional genes information


Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Accr5g01461 1 114 AS2 family AT3G47870 53.509 4.77e-38 140
       

Transcription factors information


Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF LOB Accr5g01461 LOB 1.4e-32 No_clan