Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Accr5g01460 ATGATGATGCCAATTAAAGGAGGTTCCAACAAGGCCTGCGCTGCCTGCAAATATCAGAGAAGAAAATGTTCAAAGGACTGCGCTCTGGCTCCTTATTTTCCTTGCGACGAGCCAAAAAAATTCATTAACGCTCACCGTTTGTTTGGAGTCGCCAACATCAAGAAGATCCTGGATCAGGTAGAGCCTAGACAGAGAGATGAAGCCATGACATCGATTATCTTTGAATCTAACATACGAGAACAGTTTCCTGTTATGGGATGTTTAGGAGTCATATGTAACTATAATAAGCTTGTACTTGCTGCCATGGAAGAGCTGAGGTATTTGCATCTAAGACTTTCCGTTTACAGGCAACAACATCATTGTCAAATTTCCCCAAAAATTTCTACTTCCATGTCAATGGAATTTATGCCTGTTAGTACAGATCCCTTGCCCATGTCAAACCACATTCAATATGAATCAACAAACTACTTACAATATGATAACGATGGATCAGTTATTAGATTTGATGGAGGTAGCGGCGGATTAACAAACCACTCACAAAATGATAACGATGGAGTTACTAGATTTGATGGAGGTAGCGGCGGATCAACAAACCACTCACAAAATGATAACGATGGAGTTACTAGATTTGATGGAGGTAGCGGCGGATCAACAAACCACTTACAATATGATAACGGTGGAGTTACTAGATTTGATGGAGGTAGCGGCGGATCAACAAACCACTTACAATATGATAACGGTGGAGTTACTAGATTTGATGGAGGTAGCGGCGGATCAACAAACCACTTACAATATGATAACGGTGGAGTTACTAGATTTGATGGAGGTAGCGGCGGATCAACAAACCACTTACAATATGATAACGGTGGAGTTACTAGATTTGATGGAGGTAGCGGCGGATCAACAAACCACTTACAATATGATAAGTGTACAGTTACTGGATTTGATGGAGGTAGCGGCGGATCAACAAACCACTTACAATATGATAACGGTGGAGTTACTAGATTTGATGGAGGTAGCGGCGGATCAACAAACCACTTACAATATGATAACGGTGGAGTTACTAGATTTGATAGAGGTAGTGGCGGATCAACAAACCACTTACAATATGATAACAATGGAGTTATTAGATTTGATGGAGCTAGCGGCGGATCAACAAACCACTTACAAAATGAAAATGATAACGATGGAGTTACTAGATTTGATGGGAGTAGCGGCAGATCAATAAACCACTTACAATATGATAACGATGGAGTTACTAGATTTGATGGAGGTAGCGGTGGATCAATTAGATTTGATAGAGGTAATGGCGGAAATGAAGGATTTGGTTTTCAACCATCCATCAACCACATGACTGCACAATCGACTCATTTCACACCCAACCATGAACCAGAAATAGTGGGCACAATTGATTGTGACGATTTAAATCCTTATAATGAAATGTTTTGA 1449 0.4044 MMMPIKGGSNKACAACKYQRRKCSKDCALAPYFPCDEPKKFINAHRLFGVANIKKILDQVEPRQRDEAMTSIIFESNIREQFPVMGCLGVICNYNKLVLAAMEELRYLHLRLSVYRQQHHCQISPKISTSMSMEFMPVSTDPLPMSNHIQYESTNYLQYDNDGSVIRFDGGSGGLTNHSQNDNDGVTRFDGGSGGSTNHSQNDNDGVTRFDGGSGGSTNHLQYDNGGVTRFDGGSGGSTNHLQYDNGGVTRFDGGSGGSTNHLQYDNGGVTRFDGGSGGSTNHLQYDNGGVTRFDGGSGGSTNHLQYDKCTVTGFDGGSGGSTNHLQYDNGGVTRFDGGSGGSTNHLQYDNGGVTRFDRGSGGSTNHLQYDNNGVIRFDGASGGSTNHLQNENDNDGVTRFDGSSGRSINHLQYDNDGVTRFDGGSGGSIRFDRGNGGNEGFGFQPSINHMTAQSTHFTPNHEPEIVGTIDCDDLNPYNEMF 482
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Accr5g01460 482 MobiDBLite consensus disorder prediction 337 351 - -
Accr5g01460 482 MobiDBLite consensus disorder prediction 170 287 - -
Accr5g01460 482 MobiDBLite consensus disorder prediction 232 246 - -
Accr5g01460 482 MobiDBLite consensus disorder prediction 173 225 - -
Accr5g01460 482 Pfam Lateral organ boundaries (LOB) domain 12 106 IPR004883 -
Accr5g01460 482 ProSiteProfiles LOB domain profile. 11 112 IPR004883 -
Accr5g01460 482 PANTHER LOB DOMAIN-CONTAINING PROTEIN 4-RELATED 11 139 - -
Accr5g01460 482 MobiDBLite consensus disorder prediction 334 366 - -
Accr5g01460 482 MobiDBLite consensus disorder prediction 253 267 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Accr5g01460 Accr-Chr5 40694858 40696306 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Accr5g01460 3 116 AS2 family AT3G47870 53.509 4.49e-38 140
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF LOB Accr5g01460 LOB 1.4e-32 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Accr5g01460 - - pcin:129305015 238.424