Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Accr5g01440 ATGGCAAAAATGTCTGGTAGTGCTCGTGGTCTAGAGACTAGAAAGAAGAGAACGATTTCCATTTGCCTTGAAGAAGATTGCTGTGTTCAAGAGAATGATGAACTCAAGTCTGGTAAAGAAGAGATGGGTGGAGAGAGAGAAGAAAATGAAGAAAGGTTGAAGATGAAGGATTACCAGTCCCTCCAACTGCGTTTCTTTGATATCTTGCGAAGAGAAGCTGCTGAAAAAGTTATAGCAGATTCATCTAATTCCCATGATGAAACCGAAGAGCCTGAGCTCCTGTCACTTTGCCTGGGAAGAAGTCCAAGGGACCCCAAAAAAGAAACAAGAATCGGAAACACTGCTAAACATAAAGAAAGTGAAGATCTGGAGGCTTGCCTTACCCTTGGATTAGACTCCAATTGTGAGTTGTCAATGGAGATGGTGTCTGATCAGAGCCCAGGGGAAACTAAGGAAGCAGACATAGAGGGAACATGGCAATCAAATAAATCTGTCAAGGCCAAAAATGGAGAAGATCATGAAATTTCAGAGCAGATACCTGCTAAGAAATCGAGAGTTTCTGTGAGAGCAAGATGTGACACCCCCACGATGAGTGATGGATGCCAGTGGAGAAAATATGGACAGAAGATAGCCAAAGGGAATCCTTGTCCACGTGCATACTATCGCTGCACGGTTGCTCCAGCATGTCCAGTAAGAAAACAGGTGCAAAGATGTGCTGAGGACATGTCTATCTTAATCACTACATACGAAGGGACCCACAACCACCCACTTCCAGTTTCAGCCACAGCCATGGCTTCCACTACTTCAGCTGCTGCTTCCATGTTATTGTCAGGCTCTTCAACATCTCAGCCTGTAGATAACAGTTTTGCATCATTCACAAATGCTCCTAGACTGCTTAATGGCCAAAACCTTGGACCTTTTGATCTATCAAGATCAAAAGAGGTCTTTTTCCCCAACCGTGACTCACCTTTGTTCCCAACAATCACTCTAGACTTAACTTCTGGTTCATCCTCATCAACCCATGTCAATAATCTTCTCCCTTCAAGCTTTGCTTTAAACCCAAGATTTCCTCCAACAAGTCTAAGTTTTTGCTCAAAGGAGCCCAACATTCAACAAGCAGTGTGGGGTAATGGAGTCCTTAATAATGAGAGAACCCACATGAGGTCAGTTGAGCTGGGAACTCAATTTCAACAACAGTTACATCAAAACTGCCTGCAAAACCAAGCTCCTCCTTCACAAGAGGCTTTAGCAGAAACCTTAACCAGAGCAATCAGTACGGATCCTAGACTTCGATCAGTAATAGCTGCAGCAGTTTCATCTATAGTGGGTCAAGGATCCACCAATGTGAACCAAGCACGGGGAGGGGAAATTTTAGAGTTAGGGTTGAACTTGAAGCTAGGAGAGCATTCTCAATTTGCTTCTTCTAATCTGTTGGCCCAAAATGGGAAAGGATGCTTACCAGGTTATTTCAACAGATTGTCATCAAACTCCTATACCGGAAACTTCATGCCTCTACAACCTCCAGTTCCATTTTCTGTCTCTAAGAGAAAAGTGCCTCCTACCATTAGTGATCAGATCAATCATTAA 1587 0.4342 MAKMSGSARGLETRKKRTISICLEEDCCVQENDELKSGKEEMGGEREENEERLKMKDYQSLQLRFFDILRREAAEKVIADSSNSHDETEEPELLSLCLGRSPRDPKKETRIGNTAKHKESEDLEACLTLGLDSNCELSMEMVSDQSPGETKEADIEGTWQSNKSVKAKNGEDHEISEQIPAKKSRVSVRARCDTPTMSDGCQWRKYGQKIAKGNPCPRAYYRCTVAPACPVRKQVQRCAEDMSILITTYEGTHNHPLPVSATAMASTTSAAASMLLSGSSTSQPVDNSFASFTNAPRLLNGQNLGPFDLSRSKEVFFPNRDSPLFPTITLDLTSGSSSSTHVNNLLPSSFALNPRFPPTSLSFCSKEPNIQQAVWGNGVLNNERTHMRSVELGTQFQQQLHQNCLQNQAPPSQEALAETLTRAISTDPRLRSVIAAAVSSIVGQGSTNVNQARGGEILELGLNLKLGEHSQFASSNLLAQNGKGCLPGYFNRLSSNSYTGNFMPLQPPVPFSVSKRKVPPTISDQINH 528
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Accr5g01440 528 MobiDBLite consensus disorder prediction 101 117 - -
Accr5g01440 528 MobiDBLite consensus disorder prediction 33 54 - -
Accr5g01440 528 PANTHER WRKY TRANSCRIPTION FACTOR 36-RELATED 31 451 IPR044810 GO:0003700
Accr5g01440 528 FunFam probable WRKY transcription factor 31 182 259 - -
Accr5g01440 528 Gene3D WRKY domain 181 259 IPR036576 GO:0003700|GO:0006355|GO:0043565
Accr5g01440 528 ProSiteProfiles WRKY domain profile. 192 258 IPR003657 GO:0003700|GO:0006355|GO:0043565
Accr5g01440 528 MobiDBLite consensus disorder prediction 143 179 - -
Accr5g01440 528 SUPERFAMILY WRKY DNA-binding domain 190 258 IPR036576 GO:0003700|GO:0006355|GO:0043565
Accr5g01440 528 SMART WRKY_cls 197 257 IPR003657 GO:0003700|GO:0006355|GO:0043565
Accr5g01440 528 Pfam WRKY DNA -binding domain 199 256 IPR003657 GO:0003700|GO:0006355|GO:0043565
Accr5g01440 528 MobiDBLite consensus disorder prediction 98 117 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Accr5g01440 Accr-Chr5 40505613 40507792 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Accr5g01440 42 493 WRKY Transcription Factor Family AT5G15130 42.084 4.81e-79 254
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF WRKY Accr5g01440 WRKY 5.2e-24 CL0274
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Accr5g01440 - - gmx:100819296 524.242