Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Accr5g01439 ATGTCAGTGGAGACCATGGCAAAAATGTCTGGTAGTGCTCGTGGTCTAGAGACTAGAAAGAAGAGAACGATTTCCATTTGCCTTGAAGAAGATTGCTGTGTTCAAGAGAATGATGAACTCAAGTCTGGTAAAGAAGAGATGGGTGGAGAGAGAGAAGAAAATGAAGAAAGGTTGAAGATGAAGGATTACCAGTCCCTCCAACTGCGTTTCTTTGATATCTTGCGAAGAGAAGCTGCTGAAAAAGTTATAGCAGATTCATCTAATTCCCATGATGAAACCGAAGAGCCTGAGCTCCTGTCACTTTGCCTGGGAAGAAGTCCAAGGGACCCCAAAAAAGAAACAAGAATCGGAAACACTGCTAAACATAAAGAAAGTGAAGATCTGGAGGCTTGCCTTACCCTTGGATTAGACTCCAATTGTGAGTTGTCAATGGAGATGGTGTCTGATCAGAGCCCAGGGGAAACTAAGGAAGCAGACATAGAGGGAACATGGCAATCAAATAAATCTGTCAAGGCCAAAAATGGAGAAGATCATGAAATTTCAGAGCAGATACCTGCTAAGAAATCGAGAGTTTCTGTGAGAGCAAGATGTGACACCCCCACGATGAGTGATGGATGCCAGTGGAGAAAATATGGACAGAAGATAGCCAAAGGGAATCCTTGTCCACGTGCATACTATCGCTGCACGGTTGCTCCAGCATGTCCAGTAAGAAAACAGGTGCAAAGATGTGCTGAGGACATGTCTATCTTAATCACTACATACGAAGGGACCCACAACCACCCACTTCCAGTTTCAGCCACAGCCATGGCTTCCACTACTTCAGCTGCTGCTTCCATGTTATTGTCAGGCTCTTCAACATCTCAGCCTGTAGATAACAGTTTTGCATCATTCACAAATGCTCCTAGACTGCTTAATGGCCAAAACCTTGGACCTTTTGATCTATCAAGATCAAAAGAGGTCTTTTTCCCCAACCGTGACTCACCTTTGTTCCCAACAATCACTCTAGACTTAACTTCTGGTTCATCCTCATCAACCCATGTCAATAATCTTCTCCCTTCAAGCTTTGCTTTAAACCCAAGATTTCCTCCAACAAGTCTAAGTTTTTGCTCAAAGGAGCCCAACATTCAACAAGCAGTGTGGGGTAATGGAGTCCTTAATAATGAGAGAACCCACATGAGGTCAGTTGAGCTGGGAACTCAATTTCAACAACAGTTACATCAAAACTGCCTGCAAAACCAAGCTCCTCCTTCACAAGAGGCTTTAGCAGAAACCTTAACCAGAGCAATCAGTACGGATCCTAGACTTCGATCAGTAATAGCTGCAGCAGTTTCATCTATAGTGGGTCAAGGATCCACCAATGTGAACCAAGCACGGGGAGGGGAAATTTTAGAGTTAGGGTTGAACTTGAAGCTAGGAGAGCATTCTCAATTTGCTTCTTCTAATCTGTTGGCCCAAAATGGGAAAGGATGCTTACCAGGTTATTTCAACAGATTGTCATCAAACTCCTATACCGGAAACTTCATGCCTCTACAACCTCCAGTTCCATTTTCTGTCTCTAAGAGAAAAGTGCCTCCTACCATTAGTGATCAGATCAATCATTAA 1602 0.4351 MSVETMAKMSGSARGLETRKKRTISICLEEDCCVQENDELKSGKEEMGGEREENEERLKMKDYQSLQLRFFDILRREAAEKVIADSSNSHDETEEPELLSLCLGRSPRDPKKETRIGNTAKHKESEDLEACLTLGLDSNCELSMEMVSDQSPGETKEADIEGTWQSNKSVKAKNGEDHEISEQIPAKKSRVSVRARCDTPTMSDGCQWRKYGQKIAKGNPCPRAYYRCTVAPACPVRKQVQRCAEDMSILITTYEGTHNHPLPVSATAMASTTSAAASMLLSGSSTSQPVDNSFASFTNAPRLLNGQNLGPFDLSRSKEVFFPNRDSPLFPTITLDLTSGSSSSTHVNNLLPSSFALNPRFPPTSLSFCSKEPNIQQAVWGNGVLNNERTHMRSVELGTQFQQQLHQNCLQNQAPPSQEALAETLTRAISTDPRLRSVIAAAVSSIVGQGSTNVNQARGGEILELGLNLKLGEHSQFASSNLLAQNGKGCLPGYFNRLSSNSYTGNFMPLQPPVPFSVSKRKVPPTISDQINH 533
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Accr5g01439 533 PANTHER WRKY TRANSCRIPTION FACTOR 36-RELATED 36 456 IPR044810 GO:0003700
Accr5g01439 533 SMART WRKY_cls 202 262 IPR003657 GO:0003700|GO:0006355|GO:0043565
Accr5g01439 533 SUPERFAMILY WRKY DNA-binding domain 195 263 IPR036576 GO:0003700|GO:0006355|GO:0043565
Accr5g01439 533 MobiDBLite consensus disorder prediction 103 122 - -
Accr5g01439 533 MobiDBLite consensus disorder prediction 106 122 - -
Accr5g01439 533 ProSiteProfiles WRKY domain profile. 197 263 IPR003657 GO:0003700|GO:0006355|GO:0043565
Accr5g01439 533 Gene3D WRKY domain 186 264 IPR036576 GO:0003700|GO:0006355|GO:0043565
Accr5g01439 533 MobiDBLite consensus disorder prediction 148 187 - -
Accr5g01439 533 MobiDBLite consensus disorder prediction 171 187 - -
Accr5g01439 533 Pfam WRKY DNA -binding domain 204 261 IPR003657 GO:0003700|GO:0006355|GO:0043565
Accr5g01439 533 FunFam probable WRKY transcription factor 31 187 264 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Accr5g01439 Accr-Chr5 40505613 40507807 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Accr5g01439 51 498 WRKY Transcription Factor Family AT5G15130 42.222 7.09e-79 254
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF WRKY Accr5g01439 WRKY 5.3e-24 CL0274
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Accr5g01439 - - gmx:100819296 526.554