Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Accr5g01433 ATGGCCTTCCCTCCTTCTCACACTTTCATGTTTCACACCAATCACTCCCATGAAGATCATCACCATCATCACGACCCCCACCTCTCTTCATCACCATCTCTCAAATCTTTCCCTCCATTACCACCCCAGCACTTTCAAACTCGGAATAGTGCACCCTTCATGGTGAAGAGATCGATGTCGTTTTCAGGGGTAGAGAGCAAGTACGACATGGAGGCCGTGAACGGAGGCGATGACGATTTGTCGGACGATGGGTCGATGCAGATAGGGGAGAAGAAAAAGAGGCTGAACATGGAGCAGGTGAAGGCACTTGAGAAGAGCTTTGAGGTTGGGAACAAGCTTGAGCCAGAGAGGAAACTGGAGCTGGCTAAGGCTTTGGGGCTGCAGCCACGTCAGATCGCCATTTGGTTTCAGAACAGGAGAGCCCGATGGAAGACCAAGAACCTCGAGAAAGAATATGAATCCCTCAAGAAACAGTTTGAAGCTCTCAAGGCCGATAACGATGCTCTTAACCTTCAGAACCAGAAACTTCATGCTGAGTTACAAGCTCTGAAAGGAAGAGATCATCAGTGCGAAGGAGGAACAGTAGTGAGGCTGGTGAAGAAAGAAACGGAGGGTTCATGGAGCAATAATAATGGAAGTGACAACAGTTCAGACATCAATTTGGACCTTTCAAAAACACCACTTAGAGAGAGTCCTGTTGGTAAAAGCCATCAGCTCGTATCAGGCTCTAATAATAATCTAAAGCCCACCAGCATAACACAACTCCTCCAGTTCTCAACAAGATCAGACCTCCAAGACGAAACCTTCTCCAACATGTTCAACACCACCAACACTGCTACTATCGATGATGGTCATAATCAGCAGCACAACTTCTGGACCTGGCCTCACGAGCACCACCACCATTTTCATTGA 912 0.4759 MAFPPSHTFMFHTNHSHEDHHHHHDPHLSSSPSLKSFPPLPPQHFQTRNSAPFMVKRSMSFSGVESKYDMEAVNGGDDDLSDDGSMQIGEKKKRLNMEQVKALEKSFEVGNKLEPERKLELAKALGLQPRQIAIWFQNRRARWKTKNLEKEYESLKKQFEALKADNDALNLQNQKLHAELQALKGRDHQCEGGTVVRLVKKETEGSWSNNNGSDNSSDINLDLSKTPLRESPVGKSHQLVSGSNNNLKPTSITQLLQFSTRSDLQDETFSNMFNTTNTATIDDGHNQQHNFWTWPHEHHHHFH 303
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Accr5g01433 303 FunFam Homeobox-leucine zipper protein ATHB-13 82 150 - -
Accr5g01433 303 MobiDBLite consensus disorder prediction 1 47 - -
Accr5g01433 303 ProSiteProfiles 'Homeobox' domain profile. 86 146 IPR001356 GO:0003677
Accr5g01433 303 MobiDBLite consensus disorder prediction 30 47 - -
Accr5g01433 303 Coils Coil 138 186 - -
Accr5g01433 303 Gene3D - 84 155 - -
Accr5g01433 303 PANTHER HOMEOBOX-LEUCINE ZIPPER PROTEIN 60 236 IPR045224 GO:0003700
Accr5g01433 303 SMART HOX_1 89 150 IPR001356 GO:0003677
Accr5g01433 303 Pfam Homeodomain 91 144 IPR001356 GO:0003677
Accr5g01433 303 CDD homeodomain 91 147 IPR001356 GO:0003677
Accr5g01433 303 MobiDBLite consensus disorder prediction 12 29 - -
Accr5g01433 303 PRINTS Lambda-repressor HTH signature 117 126 IPR000047 GO:0003677
Accr5g01433 303 PRINTS Lambda-repressor HTH signature 126 142 IPR000047 GO:0003677
Accr5g01433 303 Pfam Homeobox associated leucine zipper 146 185 IPR003106 GO:0006355|GO:0043565
Accr5g01433 303 SUPERFAMILY Homeodomain-like 81 148 IPR009057 -
Accr5g01433 303 ProSitePatterns 'Homeobox' domain signature. 121 144 IPR017970 GO:0000981|GO:0006355
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Accr5g01433 Accr-Chr5 40446453 40448181 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Accr5g01433 1 295 Homeobox Transcription Factor Family AT5G15150 45.231 9.49e-72 222
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF HB-HD-ZIP Accr5g01433 Homeodomain 1e-15 CL0123
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Accr5g01433 K09338 - gmx:100790803 309.686