Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Accr5g01424 ATGGAGGAGGAGAACGAAATGGATACATTTGATGATATTCTGCTGCCTGGTTTTCGGTTTCATCCGACAGACGAGGAACTTGTTGACTTTTACCTCAGGAAAAAAATAGAGCAAAAGACTTTGCCTATTGACATCATTAAGCAAGTGGATATATACAAGTACGACCCATGGGATCTTCCAAGGATGGCAAGCAGTAGTAGCGAAAAAGAGTTATACTTTTACTGTCAAAGAGAGAGAAAATACAGAAACAGTGCTCGCCCAAATAGAGTGACCAGAGCTGGGTTCTGGAAGGCCACTGGAACTGATCGACCTATATACTCTTCAAAGGGAAATTGTATCGGTTTAAAGAAGTCTCTTGTGTTCTACAGAGGCAGAGCCGCCCAAGGCACCAAAACTGAATGGATGATGCATGAGTTTCGCCTTCCTTCTCTTTCCGATTCTTCTCTTCCTAGAAACCTCTCTCACAAAACGCTCCCTCCCACTGAGTCATGGGCAATTTGTAGGATATTCAAGAAAACCACCTCACAGAAACCTTCATCTCATTCTCACCCCTGCATCCCTCAGTTCCCAGAGAGCTTGCCGGTGGGTGATGTACTCAATCAAGGTGGTGGTGCCACTGCCTCCGGCAACCACTTCAGTACCGAAAATATCTCAGGTGCGTATTTTTCAGCTTCAGATGTTCCCTGTTACAAACCCATCTCCACACTGGAAGCGTCAGGATCCATGATTTTGAACTCAGACTGGGAAGGATTTGAAGGGGCAAGCCAGCAGTTTAGTCAGGGCATGCAGGGGAATATAAACAGAGCAACAGGGTTTTCTTTCCCTGCACCTGCTTCTGGGGATGTTTGGAAATCTCCTCTGCTATGGGACACCCCATTGTTCAACTGA 888 0.4595 MEEENEMDTFDDILLPGFRFHPTDEELVDFYLRKKIEQKTLPIDIIKQVDIYKYDPWDLPRMASSSSEKELYFYCQRERKYRNSARPNRVTRAGFWKATGTDRPIYSSKGNCIGLKKSLVFYRGRAAQGTKTEWMMHEFRLPSLSDSSLPRNLSHKTLPPTESWAICRIFKKTTSQKPSSHSHPCIPQFPESLPVGDVLNQGGGATASGNHFSTENISGAYFSASDVPCYKPISTLEASGSMILNSDWEGFEGASQQFSQGMQGNINRATGFSFPAPASGDVWKSPLLWDTPLFN 295
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Accr5g01424 295 Gene3D NAC domain 23 176 IPR036093 GO:0003677|GO:0006355
Accr5g01424 295 ProSiteProfiles NAC domain profile. 14 172 IPR003441 GO:0003677|GO:0006355
Accr5g01424 295 Pfam No apical meristem (NAM) protein 16 141 IPR003441 GO:0003677|GO:0006355
Accr5g01424 295 SUPERFAMILY NAC domain 14 172 IPR036093 GO:0003677|GO:0006355
Accr5g01424 295 FunFam NAC domain-containing protein 35 23 175 - -
Accr5g01424 295 PANTHER PROTEIN CUP-SHAPED COTYLEDON 2-RELATED 13 210 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Accr5g01424 Accr-Chr5 40343530 40344643 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Accr5g01424 2 187 NAC Transcription Factor Family AT5G39820 63.902 1.81e-88 265
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF NAC Accr5g01424 NAM 1e-35 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Accr5g01424 - - qsa:O6P43_004491 315.464