Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Accr5g01420 ATGGGAAGGCCGCCTTGTTGTGACAAAGAAGGTGTCAAGAAAGGACCTTGGACACCTGAAGAAGATATCTTGCTGGTGTCATACATACAGCAAAATGGCCCAGGGAATTGGAAGGCTGTTCCCACCAATACAGGGTTGTCTCGGTGCAGTAAGAGTTGCCGACTTAGATGGACTAATTACCTGAGGCCAGGAATCAAGCGTGGCAACTTCACTGACCAAGAAGAGAAGATGATCATCCATCTTCAAGCTCTTCTGGGCAATAGATGGGCTGCGATAGCCACGTACCTTCCACAGAGAACAGATAACGACATAAAGAATTATTGGAACACCCACTTGAAGAAGAAGCTCAAGAAAATGCAGACGGGTCTGCAAGGAGATAGCATGAGAGATGGGTTTTCGGGTTCGAACAGTACAATGCCTCGAGGCCAGTGGGAAAGGAGGCTCCAAACTGATATCCAAATGGCTAAGAGAGCTCTTCGAGACGCACTGTCACCTCATAAGCCTTCTGGTGCTTCATTTCAATCCAACACCTCTAATAATAATAATAACAATAATACAGGCTCCTTCTCTTCCACTTCGTCAGCGAAACCAACCCAGTCCTTATGCTATGCGTCTACTGCTGACAACATAGCTCGTTTGCTCAAGGAATGGAAGAAGAATCCACCAAAGAAAAATCCTTCTCGCACTTCTAACTCCACAATGACTCATCAGAACTCACTCGGAAACTTGGCTGCTTGTAGCAAAGAAGCCCCAGACCAAGGAAACAGCTTTGAGACATGCGAGACGTTTGAGTCATTGTTTGGGTTGGAGTCTTTGGATTCTTCGAATTCTGAGTTTTCCCAATCTCCGTCTCCTGACCCTGAGCCTATAAGTACTACTACTCTTTTCCAAGATGAGAGCAAGCCGGAGAATGGTGCAGAATTGCCATTTTCTTTTCTTGAGAAATGGCTTTTAGATGAAGTTACTTTGCCAGGAATAAGTTAG 984 0.4543 MGRPPCCDKEGVKKGPWTPEEDILLVSYIQQNGPGNWKAVPTNTGLSRCSKSCRLRWTNYLRPGIKRGNFTDQEEKMIIHLQALLGNRWAAIATYLPQRTDNDIKNYWNTHLKKKLKKMQTGLQGDSMRDGFSGSNSTMPRGQWERRLQTDIQMAKRALRDALSPHKPSGASFQSNTSNNNNNNNTGSFSSTSSAKPTQSLCYASTADNIARLLKEWKKNPPKKNPSRTSNSTMTHQNSLGNLAACSKEAPDQGNSFETCETFESLFGLESLDSSNSEFSQSPSPDPEPISTTTLFQDESKPENGAELPFSFLEKWLLDEVTLPGIS 327
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Accr5g01420 327 CDD SANT 69 112 IPR001005 -
Accr5g01420 327 ProSiteProfiles Myb-like domain profile. 62 112 IPR001005 -
Accr5g01420 327 MobiDBLite consensus disorder prediction 273 306 - -
Accr5g01420 327 SUPERFAMILY Homeodomain-like 11 108 IPR009057 -
Accr5g01420 327 CDD SANT 16 61 IPR001005 -
Accr5g01420 327 SMART sant 66 114 IPR001005 -
Accr5g01420 327 SMART sant 13 63 IPR001005 -
Accr5g01420 327 MobiDBLite consensus disorder prediction 126 143 - -
Accr5g01420 327 Gene3D - 13 66 - -
Accr5g01420 327 MobiDBLite consensus disorder prediction 120 143 - -
Accr5g01420 327 Gene3D - 69 129 - -
Accr5g01420 327 FunFam MYB-related transcription factor 13 66 - -
Accr5g01420 327 MobiDBLite consensus disorder prediction 216 237 - -
Accr5g01420 327 MobiDBLite consensus disorder prediction 162 197 - -
Accr5g01420 327 ProSiteProfiles Myb-like domain profile. 9 61 IPR001005 -
Accr5g01420 327 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 66 116 IPR017930 -
Accr5g01420 327 MobiDBLite consensus disorder prediction 273 300 - -
Accr5g01420 327 PANTHER MYB FAMILY TRANSCRIPTION FACTOR 1 236 - -
Accr5g01420 327 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 9 65 IPR017930 -
Accr5g01420 327 FunFam Transcription factor MYB30 68 126 - -
Accr5g01420 327 Pfam Myb-like DNA-binding domain 67 112 IPR001005 -
Accr5g01420 327 Pfam Myb-like DNA-binding domain 14 61 IPR001005 -
Accr5g01420 327 MobiDBLite consensus disorder prediction 168 197 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Accr5g01420 Accr-Chr5 40316356 40317528 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Accr5g01420 1 320 MYB Transcription Factor Family AT5G62470 50.423 3.88e-101 300
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF MYB Accr5g01420 Myb_DNA-binding 7.3e-15 CL0123
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Accr5g01420 K09422 - gmx:778080 392.119