Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Accr5g01419 ATGAGGAAACGTCAAGTTGTGGTGAGAAGAGAGGAGCCAGTTGAGTGCTCAAACTCATCGTCTTTTACTGTTAGGAGTGTGAGATATGGAGAGTGCCAAAAGAATCACGCAGCCAACGTCGGAGGCTACGCCGTGGATGGTTGCCGGGAGTTCATGGCGAGTGGCGACGAAGGCACAGCGGCCGCTCTGACCTGTGCCGCGTGTGGTTGCCACAGGAACTTTCACAAGAGAGAGGTGGAGACTGAAGTAGTGTGTGAGTGCTCTTCTCCTACCTCCAACGGCACTTGA 288 0.5417 MRKRQVVVRREEPVECSNSSSFTVRSVRYGECQKNHAANVGGYAVDGCREFMASGDEGTAAALTCAACGCHRNFHKREVETEVVCECSSPTSNGT 95
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Accr5g01419 95 Pfam ZF-HD protein dimerisation region 27 79 IPR006456 -
Accr5g01419 95 ProSiteProfiles Zinc-finger ZF-HD dimerization-type profile. 29 78 IPR006456 -
Accr5g01419 95 PANTHER ZINC-FINGER HOMEODOMAIN PROTEIN 2 2 82 - -
Accr5g01419 95 NCBIfam ZF-HD homeobox protein Cys/His-rich dimerization domain 28 79 IPR006456 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Accr5g01419 Accr-Chr5 40291991 40292278 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Accr5g01419 1 94 Zinc finger-homeobox gene family AT3G28917 74.747 3.56e-44 136
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF zf-HD Accr5g01419 ZF-HD_dimer 1.5e-30 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Accr5g01419 - - vvi:100262881 153.68