Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Accr5g01418 ATGGACTTAACGCCCTCCATCGCCAACAACAACCCCACCACCACCACCACCACCGCAACCAATACTCCTACTAGTACAAAATCCCCAGAACATGACAGTGAAACTCCGACCCGGATCCAGACCGCCGCCAAGCCTTTGTCCTTCTCCAACGGTGTCCTCAAGCGCCACCACCACCGCCGCCTTCCCACCCACCCACTCCCTGTCACTTACAAGGAATGCTTGAAAAACCATGCAGCCAGCTTAGGAGGCCACGCCCTCGACGGTTGTGGCGAGTTCATGGCCTCTCCCACCGCTAACCCTGCCGACCCCAGCTCCATCAAATGCGCCGCCTGTGGCTGCCACCGCAATTTCCACCGCCGCGAGCCCGAAGAGCCTATCTCCACAACCCACGTCATTGAGTATCAGTCTCACCATCGACACCATCCCCCGCCGCCTCCGCCTTTCCAGGTTTCCAATCGAAGCCCCAATTCAGCGTCGCCACCTCCGATCTCCTCTTCGTACTACCCGTCCGCACCCCATATGCTTCTGGCTCTCTCTGCCGCCGGGATTCAAGCTCCTCCGGAGAGCGCGGCTGCTCCCGCCAACTTTCTGACAACGCCGAGCCCGAATGCGCGGAAGCGGTTCAGGACCAAGTTCACCCAGGATCAGAAGGAAAAGATGTACCATTTCGCTGAGAGGGTGGGGTGGAAGATGCAGAAGAGGGACGAAGACTTGGTTCAAGAATTCTGCAATGAGGTTGGGGTTGACAGGGGAGTGTTGAAGGTTTGGATGCACAACAACAAGAACACTTTGGGCAAGAGAGATGCTGATAATAATAATGATGGTAGGAACGCTCTAGAGCAAGACCCTCAAGCCCTCACCGCCGTAATCCATGCCAATAACGACAACGGCAGCGCGGAGGATGCGAATCACCACAACCAACTCTTCGCTGCCAACGATAATAGTGGGGCAAACCTTGGTACCAATGGGTCCTTCTCTTCCTCTTGA 987 0.5643 MDLTPSIANNNPTTTTTTATNTPTSTKSPEHDSETPTRIQTAAKPLSFSNGVLKRHHHRRLPTHPLPVTYKECLKNHAASLGGHALDGCGEFMASPTANPADPSSIKCAACGCHRNFHRREPEEPISTTHVIEYQSHHRHHPPPPPPFQVSNRSPNSASPPPISSSYYPSAPHMLLALSAAGIQAPPESAAAPANFLTTPSPNARKRFRTKFTQDQKEKMYHFAERVGWKMQKRDEDLVQEFCNEVGVDRGVLKVWMHNNKNTLGKRDADNNNDGRNALEQDPQALTAVIHANNDNGSAEDANHHNQLFAANDNSGANLGTNGSFSSS 328
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Accr5g01418 328 FunFam Zinc-finger homeodomain protein 2 195 266 - -
Accr5g01418 328 PANTHER ZINC-FINGER HOMEODOMAIN PROTEIN 2 41 264 - -
Accr5g01418 328 SUPERFAMILY Homeodomain-like 200 266 IPR009057 -
Accr5g01418 328 NCBIfam ZF-HD homeobox protein Cys/His-rich dimerization domain 69 121 IPR006456 -
Accr5g01418 328 Gene3D - 198 266 - -
Accr5g01418 328 Pfam ZF-HD protein dimerisation region 68 122 IPR006456 -
Accr5g01418 328 ProSiteProfiles Zinc-finger ZF-HD dimerization-type profile. 70 121 IPR006456 -
Accr5g01418 328 MobiDBLite consensus disorder prediction 1 40 - -
Accr5g01418 328 MobiDBLite consensus disorder prediction 133 165 - -
Accr5g01418 328 NCBIfam homeobox domain, ZF-HD class 205 262 IPR006455 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Accr5g01418 Accr-Chr5 40281434 40282420 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Accr5g01418 27 264 ZF-HD Transcription Factor Family AT3G28920 57.371 2.61e-75 232
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF zf-HD Accr5g01418 ZF-HD_dimer 1.5e-28 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Accr5g01418 - - jre:108985975 377.096