Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Accr5g01415 ATGTGGAGCCTCAATCCTGAAAGAGAGCAGCCGGACGACCCAAGAACTCATAAACGATCTTTTCTTCTTCTTTCCTTCGCAAAACTTGCACAGAATTATCCTCCTGGTTTTCTTCGACAGGTATTGGCAGAGATTATAGGAACATATCTGTTGGTGTTTGTGGGAAGTGGGTCGGCTGCACTTAATGCTTACGATGAGCAGAAAGTATCAAAACTAGGAGCTTCACTTGCAGGAGGATTCATAGTGATTGTGATGATCTATGCCATCGGACACATCTCTGGTGCTCACATGAACCCAGCTGTGTCCTTAGCTTTTGCCGCTGTGAAGCATTTTCCATGGAAACAGGTCCCATTATACGTGGCAGCACAATTGGTAGGAGCCATTTCTGCCTCGTTTACGTTGCGGCTGATATTGGACCCAATAAAACAGCTTGGGACAACCTCACCTTCTGGAAGTGATGCTCAAGCTCTCGCCATGGAGATAGTGGCAACATTCACTATGATGTTCATCGCCTCCGCCGTGTCAACTGATGCAAAAGCTGTCGGAGAGCTCGCAGGAGTTGCAGTAGGCTCTTCAGTATTCATAGCAAGCATCCTTGCAGGACCTATATCAGGGGGATCAATGAACCCTGCAAGAACACTGGGTCCTGCAATAGCAAGTGGTTCCTATAAAGGACTTTGGGTCTATCTGGTGGGACCAATTACTGGGGCACTTTTGGGAGCATGGTCTTACACTACTATCAAAGAGACAGACGAGCCAACTCCGGCCACCTCACTGATATCATTTCCCTTAGAGCTGGGCTCAAAAAATAGGGAAACTGAGTATGTCAAAAGCAGAGACGACCCACAAATTATGAGTGAAAATAATGTTTAA 873 0.4651 MWSLNPEREQPDDPRTHKRSFLLLSFAKLAQNYPPGFLRQVLAEIIGTYLLVFVGSGSAALNAYDEQKVSKLGASLAGGFIVIVMIYAIGHISGAHMNPAVSLAFAAVKHFPWKQVPLYVAAQLVGAISASFTLRLILDPIKQLGTTSPSGSDAQALAMEIVATFTMMFIASAVSTDAKAVGELAGVAVGSSVFIASILAGPISGGSMNPARTLGPAIASGSYKGLWVYLVGPITGALLGAWSYTTIKETDEPTPATSLISFPLELGSKNRETEYVKSRDDPQIMSENNV 290
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Accr5g01415 290 CDD MIP 39 247 IPR000425 GO:0015267|GO:0016020|GO:0055085
Accr5g01415 290 PANTHER AQUAPORIN NIP2-1 21 252 IPR034294 -
Accr5g01415 290 ProSitePatterns MIP family signature. 96 104 IPR022357 -
Accr5g01415 290 Gene3D Glycerol uptake facilitator protein. 6 256 IPR023271 -
Accr5g01415 290 SUPERFAMILY Aquaporin-like 33 255 IPR023271 -
Accr5g01415 290 PRINTS Major intrinsic protein family signature 115 134 IPR000425 GO:0015267|GO:0016020|GO:0055085
Accr5g01415 290 PRINTS Major intrinsic protein family signature 159 177 IPR000425 GO:0015267|GO:0016020|GO:0055085
Accr5g01415 290 PRINTS Major intrinsic protein family signature 39 58 IPR000425 GO:0015267|GO:0016020|GO:0055085
Accr5g01415 290 PRINTS Major intrinsic protein family signature 190 212 IPR000425 GO:0015267|GO:0016020|GO:0055085
Accr5g01415 290 PRINTS Major intrinsic protein family signature 227 247 IPR000425 GO:0015267|GO:0016020|GO:0055085
Accr5g01415 290 PRINTS Major intrinsic protein family signature 78 102 IPR000425 GO:0015267|GO:0016020|GO:0055085
Accr5g01415 290 Pfam Major intrinsic protein 37 244 IPR000425 GO:0015267|GO:0016020|GO:0055085
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Accr5g01415 Accr-Chr5 40229319 40231460 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Accr5g01415 39 253 Major Intrinsic Protein MIP AT5G37820 50.230 1.47e-73 226
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Accr5g01415 K09874 - cit:102612686 358.992