Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Accr5g01414 ATGCAAACGACAAGTCAAACTATGTGGAGCCTCAATCCTGAAAGAGAGCAGCCGGACGACCCAAGAACTCATAAACGATCTTTTCTTCTTCTTTCCTTCGCAAAACTTGCACAGAATTATCCTCCTGGTTTTCTTCGACAGGTATTGGCAGAGATTATAGGAACATATCTGTTGGTGTTTGTGGGAAGTGGGTCGGCTGCACTTAATGCTTACGATGAGCAGAAAGTATCAAAACTAGGAGCTTCACTTGCAGGAGGATTCATAGTGATTGTGATGATCTATGCCATCGGACACATCTCTGGTGCTCACATGAACCCAGCTGTGTCCTTAGCTTTTGCCGCTGTGAAGCATTTTCCATGGAAACAGGTCCCATTATACGTGGCAGCACAATTGGTAGGAGCCATTTCTGCCTCGTTTACGTTGCGGCTGATATTGGACCCAATAAAACAGCTTGGGACAACCTCACCTTCTGGAAGTGATGCTCAAGCTCTCGCCATGGAGATAGTGGCAACATTCACTATGATGTTCATCGCCTCCGCCGTGTCAACTGATGCAAAAGCTGTCGGAGAGCTCGCAGGAGTTGCAGTAGGCTCTTCAGTATTCATAGCAAGCATCCTTGCAGGACCTATATCAGGGGGATCAATGAACCCTGCAAGAACACTGGGTCCTGCAATAGCAAGTGGTTCCTATAAAGGACTTTGGGTCTATCTGGTGGGACCAATTACTGGGGCACTTTTGGGAGCATGGTCTTACACTACTATCAAAGAGACAGACGAGCCAACTCCGGCCACCTCACTGATATCATTTCCCTTAGAGCTGGGCTCAAAAAATAGGGAAACTGAGTATGTCAAAAGCAGAGACGACCCACAAATTATGAGTGAAAATAATGTTTAA 894 0.4631 MQTTSQTMWSLNPEREQPDDPRTHKRSFLLLSFAKLAQNYPPGFLRQVLAEIIGTYLLVFVGSGSAALNAYDEQKVSKLGASLAGGFIVIVMIYAIGHISGAHMNPAVSLAFAAVKHFPWKQVPLYVAAQLVGAISASFTLRLILDPIKQLGTTSPSGSDAQALAMEIVATFTMMFIASAVSTDAKAVGELAGVAVGSSVFIASILAGPISGGSMNPARTLGPAIASGSYKGLWVYLVGPITGALLGAWSYTTIKETDEPTPATSLISFPLELGSKNRETEYVKSRDDPQIMSENNV 297
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Accr5g01414 297 ProSitePatterns MIP family signature. 103 111 IPR022357 -
Accr5g01414 297 MobiDBLite consensus disorder prediction 1 22 - -
Accr5g01414 297 PANTHER AQUAPORIN NIP2-1 26 259 IPR034294 -
Accr5g01414 297 PRINTS Major intrinsic protein family signature 166 184 IPR000425 GO:0015267|GO:0016020|GO:0055085
Accr5g01414 297 PRINTS Major intrinsic protein family signature 46 65 IPR000425 GO:0015267|GO:0016020|GO:0055085
Accr5g01414 297 PRINTS Major intrinsic protein family signature 122 141 IPR000425 GO:0015267|GO:0016020|GO:0055085
Accr5g01414 297 PRINTS Major intrinsic protein family signature 197 219 IPR000425 GO:0015267|GO:0016020|GO:0055085
Accr5g01414 297 PRINTS Major intrinsic protein family signature 234 254 IPR000425 GO:0015267|GO:0016020|GO:0055085
Accr5g01414 297 PRINTS Major intrinsic protein family signature 85 109 IPR000425 GO:0015267|GO:0016020|GO:0055085
Accr5g01414 297 Gene3D Glycerol uptake facilitator protein. 10 263 IPR023271 -
Accr5g01414 297 CDD MIP 46 254 IPR000425 GO:0015267|GO:0016020|GO:0055085
Accr5g01414 297 SUPERFAMILY Aquaporin-like 40 262 IPR023271 -
Accr5g01414 297 Pfam Major intrinsic protein 44 251 IPR000425 GO:0015267|GO:0016020|GO:0055085
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Accr5g01414 Accr-Chr5 40229298 40231460 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Accr5g01414 46 260 Major Intrinsic Protein MIP AT5G37820 50.230 9.46e-74 227
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Accr5g01414 K09874 - qsa:O6P43_009088 360.147