Gene search


Sequence information


Select Gene Cds Cds_length GC_content Pep Pep_length
Accr5g01395 ATGGGTCGGTCACCATGCTGCGACAAGGTGGGCTTAAAGAAAGGACCATGGACTCCTGAGGAAGATCAGAAACTGTTAGCTTACATCGAAGAACACGGCCATGGAAGCTGGCGTGCCTTGCCAGCAAAAGCTGGACTTCAGAGGTGTGGTAAGAGCTGCAGACTGAGATGGACCAATTATCTTAGACCTGATATAAAGAGAGGGAAGTTCAGCTTGCAAGAAGAGCAAACAATCATTCAACTCCATGCTCTCCTAGGGAACAGGTGGTCAGCTATAGCAACACACTTGCCAAAGAGAACAGATAATGAGATCAAGAACTACTGGAATACGCATCTTAAGAAAAGGTTAGCCAAAATGGGAATTGACCCTGTGACGCACAAGCCCAAGAATGATGCCCTTCTCTCCATCGACGGCCAATCCAATAAGAGTGCTGCCAACCTTAGTCACATGGCTCAGTGGGAAAGTGCTAGGCTTGAAGCTGAAGCAAGGTTGGTTAGAGAATCAAAACTTCGTTCACATTCATTGCAGCAGCACCAGCTTGGCAACTCTGGGTTTTCATCTTCATCTTCTGCTTCAACTTCATCAGCTCCAGTTGCGAATAAACCAGAGGGACCTCCTATTTCCTCTCGCTCTCTAGATGTTCTAAAGGCGTGGAATAATGGAGGTTGGTTGAAATCTACTGATGGCCATAATGTTGGTGGTGGTGACCTTGAATCCCCTTCTTCTTCCCTGACTTTCTCTGAGAACGCTCCACCGATTATTACCAGTGGACTCGGAGAAAGTACAATGCCTATGATCGAGTTTGTTGGCTCGTCTGGTTCTTCAGAGACCGGTATTGTGAAAGAGGAAGGTGAGCAAGAATGGAAAGGTTATGAAAGCTCTGTTCATCTTCCAGAATACAAAGATGGTATTGATAACACCATGTCTTTTGCGTCTAGCCTGCATGAGTTGACAATGTCATTGGATGGCACATGGATTACGTCTGACTCTCTTAGGACTAGTACGGATGCTATCGCTGAGGAAGGGTTCACCAATCTTTTGCTTAATGCTAACTCCGATGACCGAAGTTTGTCGGAGGAAGGCGGAGGAGAGTCTAATAATAACTCCCACGGTAATGGATCAGGCGGCAGTGGGAGTGACCTCTATGAAGATAACAAGAACTACTGGAACAGCATTCTTAATTTAGTCAACTCTTCCCCTTCTGACTCTCCCATGTTCTGA 1221 0.4619 MGRSPCCDKVGLKKGPWTPEEDQKLLAYIEEHGHGSWRALPAKAGLQRCGKSCRLRWTNYLRPDIKRGKFSLQEEQTIIQLHALLGNRWSAIATHLPKRTDNEIKNYWNTHLKKRLAKMGIDPVTHKPKNDALLSIDGQSNKSAANLSHMAQWESARLEAEARLVRESKLRSHSLQQHQLGNSGFSSSSSASTSSAPVANKPEGPPISSRSLDVLKAWNNGGWLKSTDGHNVGGGDLESPSSSLTFSENAPPIITSGLGESTMPMIEFVGSSGSSETGIVKEEGEQEWKGYESSVHLPEYKDGIDNTMSFASSLHELTMSLDGTWITSDSLRTSTDAIAEEGFTNLLLNANSDDRSLSEEGGGESNNNSHGNGSGGSGSDLYEDNKNYWNSILNLVNSSPSDSPMF 406
       

Annotation information


Select Seq ID Length Analysis Description Start End IPR GO
Accr5g01395 406 CDD SANT 69 112 IPR001005 -
Accr5g01395 406 PANTHER MYB FAMILY TRANSCRIPTION FACTOR 1 194 - -
Accr5g01395 406 MobiDBLite consensus disorder prediction 226 247 - -
Accr5g01395 406 ProSiteProfiles Myb-like domain profile. 62 112 IPR001005 -
Accr5g01395 406 CDD SANT 16 61 IPR001005 -
Accr5g01395 406 MobiDBLite consensus disorder prediction 169 210 - -
Accr5g01395 406 FunFam MYB transcription factor 69 116 - -
Accr5g01395 406 SMART sant 66 114 IPR001005 -
Accr5g01395 406 SMART sant 13 63 IPR001005 -
Accr5g01395 406 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 62 116 IPR017930 -
Accr5g01395 406 SUPERFAMILY Homeodomain-like 11 108 IPR009057 -
Accr5g01395 406 Gene3D - 13 66 - -
Accr5g01395 406 FunFam MYB-related transcription factor 13 66 - -
Accr5g01395 406 MobiDBLite consensus disorder prediction 174 199 - -
Accr5g01395 406 Pfam Myb-like DNA-binding domain 14 61 IPR001005 -
Accr5g01395 406 Pfam Myb-like DNA-binding domain 67 112 IPR001005 -
Accr5g01395 406 MobiDBLite consensus disorder prediction 353 381 - -
Accr5g01395 406 Gene3D - 69 116 - -
Accr5g01395 406 ProSiteProfiles Myb-like domain profile. 9 61 IPR001005 -
Accr5g01395 406 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 9 61 IPR017930 -
       

Duplication type information


Select Gene Chromosome Start End Duplicated_type
Accr5g01395 Accr-Chr5 40009602 40011631 Dispersed/Wgd
       

Functional genes information


Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Accr5g01395 1 406 MYB Transcription Factor Family AT3G01140 52.506 2.08e-122 357
       

Transcription factors information


Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF MYB Accr5g01395 Myb_DNA-binding 1.5e-15 CL0123
       

Pathway information


Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Accr5g01395 K09422 - qsa:O6P43_009101 588.956