Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Accr5g01390 ATGGAGAGATCTGCAGGAGTGAGAACTGGAAGATGGTGCAAAGAAGAAGATGATCTCCTCAAGGCCTGTGTTCAAAACTATGGTGAAGGAAAATGGCATCTTGTTCCTGAAAGATCAGGCTTGAAGAGGTGCAGAAAAAGCTGTAGGCTGAGGTGGTTAAGCTATCTAAAACCAGATATCAGGAGGGGAGGCTTCTCTGAGGATGAAATTGATATGATGATCAGGCTTCACAGGCTCCTGGGAAACAGATGGTCAGTAATAGCTAAAATGCTTCCTGGAAGAACAGCAAATGGTGTGAAGAACTACTGGAACACCCATATGCGTAAGAAGGGACAACGTGGTTTATCTGATAAGGAGGGAGAGGCAGAAGAAAAAGCAGAGGATCAAACAACAGCCATTAGAAGCCATACCACAACAGTAATAAAACCTCGAGCTTTGAGGTTATCGAGAAGCTCATGGTCTTGGTGTAGAAACAATAATAATAATGATGATGGAGCTGGTTGTGAAGTCAGCGGAGACAAAAGTACACACAGTAGTGGCCCACATCATGATAAGGAGCAAAACCAGCAGGAGGTAGAAGAGGAGTCGATGGAGTGGTGGAAATGCTTGCTTTTTTATGACAGTGACCACAATATTATTGACAAGGCAGGTCATCATGATCATCAACAAATTGGTTTGTCAGTATCATCGTCATCTACGTCCAAGGATCAACATGGCGCGTTTAATCAATTCTGGGATCAGCAACTTACTTGGATTGATGACTTTCCTCTACACACCTCTCTCACGGACTTTCTCGCTTAA 801 0.4357 MERSAGVRTGRWCKEEDDLLKACVQNYGEGKWHLVPERSGLKRCRKSCRLRWLSYLKPDIRRGGFSEDEIDMMIRLHRLLGNRWSVIAKMLPGRTANGVKNYWNTHMRKKGQRGLSDKEGEAEEKAEDQTTAIRSHTTTVIKPRALRLSRSSWSWCRNNNNNDDGAGCEVSGDKSTHSSGPHHDKEQNQQEVEEESMEWWKCLLFYDSDHNIIDKAGHHDHQQIGLSVSSSSTSKDQHGAFNQFWDQQLTWIDDFPLHTSLTDFLA 266
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Accr5g01390 266 Pfam Myb-like DNA-binding domain 62 106 IPR001005 -
Accr5g01390 266 Pfam Myb-like DNA-binding domain 9 56 IPR001005 -
Accr5g01390 266 PANTHER TRANSCRIPTION FACTOR MYB8-RELATED-RELATED 4 213 - -
Accr5g01390 266 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 61 111 IPR017930 -
Accr5g01390 266 MobiDBLite consensus disorder prediction 110 131 - -
Accr5g01390 266 MobiDBLite consensus disorder prediction 164 192 - -
Accr5g01390 266 MobiDBLite consensus disorder prediction 108 138 - -
Accr5g01390 266 CDD SANT 11 56 IPR001005 -
Accr5g01390 266 ProSiteProfiles Myb-like domain profile. 4 56 IPR001005 -
Accr5g01390 266 SMART sant 61 109 IPR001005 -
Accr5g01390 266 SMART sant 8 58 IPR001005 -
Accr5g01390 266 ProSiteProfiles Myb-like domain profile. 57 107 IPR001005 -
Accr5g01390 266 SUPERFAMILY Homeodomain-like 7 103 IPR009057 -
Accr5g01390 266 CDD SANT 65 107 IPR001005 -
Accr5g01390 266 MobiDBLite consensus disorder prediction 176 192 - -
Accr5g01390 266 Gene3D - 64 140 - -
Accr5g01390 266 Gene3D - 3 61 - -
Accr5g01390 266 FunFam Myb transcription factor 9 61 - -
Accr5g01390 266 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 4 60 IPR017930 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Accr5g01390 Accr-Chr5 39896519 39897845 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Accr5g01390 2 149 MYB Transcription Factor Family AT1G66370 55.195 8.18e-51 165
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF MYB Accr5g01390 Myb_DNA-binding 6.8e-13 CL0123
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Accr5g01390 - K09422 adu:107471154 195.282