Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Accr5g01381 ATGGCACCTCGTGTAATCACGGTTTCACAGACCGGAAGCGGAGACTATCGGACGGTGCAGGAAGCAATTGATTCCCTTCCACTGGGAAACAATTGTCGGACCGTGATTCGAGTGTCTCCGGGAATCTACAAGCAACCAGTGTACGTACCCAAGACTAAGAATTTCATCACCCTTGCTGGTCTGTGCCCGGAGGATACTGTGCTTACCTGGAATAATACCGCCACCAAAATCGAACACCACCAGGCTGCTCGGGTAATAGGCACTGGTACTTTTGGCTGTGGTAGTACCATTGTGGAAGGAGAGGATTTTATTGCCGAGAACATCACGTTCGAGAATTCCTCCCCTCAGGGTTCAGGGCAAGCTGTGGCAATTAGAGTGACAGCAGATCGATGTGCCTTCTATAACTGCAGGTTCCTAGGATGGCAGGACACTCTGTACTTACACTATGGCAAACAGTACTTGAAAGATTGTTACATTGAAGGGAGCGTGGACTTTATTTTTGGCAATAGCACTGCTCTTTTGGAACATTGCCATATTCACTGCAAGGCTCAAGGCTTCATAACTGCACAGAGCAGAAAATCTTCTCATGAAACAACTGGTTATGTATTCTTAAGATGTGTCATAACGGGTAATGGAGATACTTCATACGCATATCTTGGACGCCCATGGGGACCTTTTGGAAGAGTGGTCTTTGCATACACTTATATGGATCGATGTATAAGGCCTCACGGCTGGAATAATTGGGATAAAGTCGAGAATGAGAGAACTGCTTGCTTTTATGAATACAAGTGTCATGGACATGGTTGCTGTCCATCCAAACGAGTAGCATGGGCTAGAGAATTGATGGATGAAGAAGCAGGGCAGTTCCTATCACACACTTTCATTGACCCAGATGCTGATAGACCTTGGCTTGCTCAAAGAATGGCTTTGAAGATTCCATATTCTGCTTAG 951 0.4595 MAPRVITVSQTGSGDYRTVQEAIDSLPLGNNCRTVIRVSPGIYKQPVYVPKTKNFITLAGLCPEDTVLTWNNTATKIEHHQAARVIGTGTFGCGSTIVEGEDFIAENITFENSSPQGSGQAVAIRVTADRCAFYNCRFLGWQDTLYLHYGKQYLKDCYIEGSVDFIFGNSTALLEHCHIHCKAQGFITAQSRKSSHETTGYVFLRCVITGNGDTSYAYLGRPWGPFGRVVFAYTYMDRCIRPHGWNNWDKVENERTACFYEYKCHGHGCCPSKRVAWARELMDEEAGQFLSHTFIDPDADRPWLAQRMALKIPYSA 316
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Accr5g01381 316 FunFam Pectinesterase 2 309 - -
Accr5g01381 316 Pfam Pectinesterase 6 296 IPR000070 GO:0030599|GO:0042545
Accr5g01381 316 Gene3D - 2 310 IPR012334 -
Accr5g01381 316 PANTHER ACYL-COA THIOESTER HYDROLASE YBHC-RELATED 2 303 - -
Accr5g01381 316 SUPERFAMILY Pectin lyase-like 2 303 IPR011050 -
Accr5g01381 316 ProSitePatterns Pectinesterase signature 2. 159 168 IPR033131 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Accr5g01381 Accr-Chr5 39783106 39786862 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Accr5g01381 4 309 Carbohydrate Esterase AT5G47500 39.557 8.29e-71 222
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Accr5g01381 K01051 - qsa:O6P43_004451 592.038