Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Accr5g01376 | ATGGATGGATCTGGTCGTGGTAGTGCTGGTGTGGACATGTATCTACCAAATTATAAATTAGGGAAAACGCTTGGTATTGGAGCCTTTGGCAAGGTGAAAATTGCAGAGCATGTTTTGACACGTCACAAAGTTGCCATTAAGATCCTCAACAAACGTAAAGTAAAGAACATGGAAATGGAAGAAAAAGTGAGAAGAGAAATCAAAATTTTAAGATTGTTCATGCATCCTCACATCATACGACTTTATGAAGTCATAGAAACTCCAACAGACATATTTGTTGTGATGGAGTATGTGAAATCTGGAGAGCTCTTTGACTACATAGTGGAAAAGGGTAGGTTGCAAGAAGATGAAGCTCGTATTTTTTTTCAGCAGATAATCTCGGGAGTGGAGTACTGTCACAGGAATATGGTGGCTCATAGAGACTTGAAGCCTGAGAATTTGCTGTTGGACTCCAAATGCAGTGTCAAGATTGCAGATTTTGGTCTGAGCAACGTCATGATTGATGGTCATTTCCTTAAGACAAGTTGTGGGAGCCCAAACTATGCTGCTCCTGAGGTAATCTCTGGAAAATATTATGCTGGGCCTGAAGTGGATGTCTGGAGCTGTGGTGTAATTTTATACGCTCTTCTTTGTGGCACCCTTCCTTTTGATGATGAAAATATTCCAAACCTTTTCAAGAAAATAAAGGGTGGGATATACACTCTTCCTAGTCATTTATCACCTGGTGCTAGAGATCTGATACCCAGGATGCTTGTGGTTGATCCTATGAAAAGGATGACCATACCTGAGATCCGTCAACACCCATGGTTCCAAGCTCATCTCCCTCGTTATTTGGCAGTGCCACCACCCGATACTTTACAACAAGCCAAAAAGATTGACGAGGAAATTCTTCAGGAAGTGGTTAATTTTGGATTTGATAGGAATCAGTTGGTTGAATCTCTTCGCAACAGGATACAAAATGAGGCTACTGTGACATATTATTTGCTATTGGACAATCGATTCCGTGTTTCAAGCGGCTATCTTGGTGCTGAGTTTCAAGAGAGTATGGATACTGGTTATAATCGTATGCATGCTAGTGAAGTTGCTGCTCCAGCGGTTGGGAACCGCTTTCCTGGAGGATATATGGATTATCAAGGAGCTGGATTGAGGCCACAGTTCCCTGCTGAGAGAAAATGGGCCCTTGGGCTTCAGTCTCGGGCCCATCCTCGCGAAATAATGACTGAGGTCCTTAAAGCTCTGCAAGAATTGAATGTGTGCTGGAAGAAGATTGGACACTATAACATGAAGTGCCGCTGGGTGGCTGGCATTCTGGGTCGTAGTGAAGGAATGATGAACAATCATAATCATTACTTTGGAGATGAATCCGCTATTATTGAGAATGATGCGGTTTCTAAGTCAAACATAGTCAAGTTTGAAATGCAGCTTTACAAAACCCGTGAAGAGAAGTATCTGCTTGATCTCCAAAGGGTCCATGGCCCACAGTTTCTCTTCCTGGATCTTTGTGCTTCTTTCCTGGCACAGCTACGTGTCCTCTAG | 1536 | 0.4271 | MDGSGRGSAGVDMYLPNYKLGKTLGIGAFGKVKIAEHVLTRHKVAIKILNKRKVKNMEMEEKVRREIKILRLFMHPHIIRLYEVIETPTDIFVVMEYVKSGELFDYIVEKGRLQEDEARIFFQQIISGVEYCHRNMVAHRDLKPENLLLDSKCSVKIADFGLSNVMIDGHFLKTSCGSPNYAAPEVISGKYYAGPEVDVWSCGVILYALLCGTLPFDDENIPNLFKKIKGGIYTLPSHLSPGARDLIPRMLVVDPMKRMTIPEIRQHPWFQAHLPRYLAVPPPDTLQQAKKIDEEILQEVVNFGFDRNQLVESLRNRIQNEATVTYYLLLDNRFRVSSGYLGAEFQESMDTGYNRMHASEVAAPAVGNRFPGGYMDYQGAGLRPQFPAERKWALGLQSRAHPREIMTEVLKALQELNVCWKKIGHYNMKCRWVAGILGRSEGMMNNHNHYFGDESAIIENDAVSKSNIVKFEMQLYKTREEKYLLDLQRVHGPQFLFLDLCASFLAQLRVL | 511 |
Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Accr5g01376 | 511 | Gene3D | Transferase(Phosphotransferase) domain 1 | 9 | 350 | - | - | |
Accr5g01376 | 511 | FunFam | Non-specific serine/threonine protein kinase | 9 | 348 | - | - | |
Accr5g01376 | 511 | ProSiteProfiles | Ubiquitin-associated domain (UBA) profile. | 291 | 331 | IPR015940 | - | |
Accr5g01376 | 511 | CDD | UBA_SnRK1_plant | 292 | 332 | - | - | |
Accr5g01376 | 511 | ProSitePatterns | Serine/Threonine protein kinases active-site signature. | 137 | 149 | IPR008271 | GO:0004672|GO:0006468 | |
Accr5g01376 | 511 | SMART | serkin_6 | 18 | 270 | IPR000719 | GO:0004672|GO:0005524|GO:0006468 | |
Accr5g01376 | 511 | CDD | STKc_AMPK_alpha | 15 | 270 | - | - | |
Accr5g01376 | 511 | SMART | uba_6 | 293 | 330 | IPR015940 | - | |
Accr5g01376 | 511 | SUPERFAMILY | Protein kinase-like (PK-like) | 15 | 288 | IPR011009 | - | |
Accr5g01376 | 511 | FunFam | Non-specific serine/threonine protein kinase | 395 | 509 | - | - | |
Accr5g01376 | 511 | SUPERFAMILY | KA1-like | 327 | 510 | IPR028375 | - | |
Accr5g01376 | 511 | Pfam | UBA/TS-N domain | 292 | 328 | IPR015940 | - | |
Accr5g01376 | 511 | Gene3D | Kinase associated domain 1, KA1 | 395 | 509 | - | - | |
Accr5g01376 | 511 | ProSitePatterns | Protein kinases ATP-binding region signature. | 24 | 47 | IPR017441 | GO:0005524 | |
Accr5g01376 | 511 | Pfam | Protein kinase domain | 18 | 270 | IPR000719 | GO:0004672|GO:0005524|GO:0006468 | |
Accr5g01376 | 511 | Pfam | Kinase associated domain 1 | 468 | 510 | IPR001772 | - | |
Accr5g01376 | 511 | ProSiteProfiles | Kinase associated domain 1 (KA1) profile. | 462 | 510 | IPR001772 | - | |
Accr5g01376 | 511 | ProSiteProfiles | Protein kinase domain profile. | 18 | 270 | IPR000719 | GO:0004672|GO:0005524|GO:0006468 | |
Accr5g01376 | 511 | CDD | AMPKA_C | 389 | 508 | - | - | |
Accr5g01376 | 511 | FunFam | Non-specific serine/threonine protein kinase | 7 | 99 | - | - | |
Accr5g01376 | 511 | PANTHER | MAP/MICROTUBULE AFFINITY-REGULATING KINASE | 17 | 313 | - | - |
Select | Gene | Chromosome | Start | End | Duplicated_type |
---|---|---|---|---|---|
Accr5g01376 | Accr-Chr5 | 39720307 | 39724878 | Wgd |
Select | Gene | Gene_start | Gene_end | Function | Ath_gene | Identity(%) | E-value | Score |
---|---|---|---|---|---|---|---|---|
Accr5g01376 | 18 | 271 | CBL-interacting serine-threonine protein kinases | AT2G26980 | 52.529 | 5.57e-90 | 280 |
Select | Regulatory Factors | Family | Gene | Hmm_acc | Hmm_name | E_value | Clan |
---|---|---|---|---|---|---|---|
PK | CAMK_AMPK | Accr5g01376 | Pkinase | 1.5e-78 | CL0016 |
Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Accr5g01376 | K07198 | - | gmx:100796687 | 932.554 |