Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Accr5g01376 ATGGATGGATCTGGTCGTGGTAGTGCTGGTGTGGACATGTATCTACCAAATTATAAATTAGGGAAAACGCTTGGTATTGGAGCCTTTGGCAAGGTGAAAATTGCAGAGCATGTTTTGACACGTCACAAAGTTGCCATTAAGATCCTCAACAAACGTAAAGTAAAGAACATGGAAATGGAAGAAAAAGTGAGAAGAGAAATCAAAATTTTAAGATTGTTCATGCATCCTCACATCATACGACTTTATGAAGTCATAGAAACTCCAACAGACATATTTGTTGTGATGGAGTATGTGAAATCTGGAGAGCTCTTTGACTACATAGTGGAAAAGGGTAGGTTGCAAGAAGATGAAGCTCGTATTTTTTTTCAGCAGATAATCTCGGGAGTGGAGTACTGTCACAGGAATATGGTGGCTCATAGAGACTTGAAGCCTGAGAATTTGCTGTTGGACTCCAAATGCAGTGTCAAGATTGCAGATTTTGGTCTGAGCAACGTCATGATTGATGGTCATTTCCTTAAGACAAGTTGTGGGAGCCCAAACTATGCTGCTCCTGAGGTAATCTCTGGAAAATATTATGCTGGGCCTGAAGTGGATGTCTGGAGCTGTGGTGTAATTTTATACGCTCTTCTTTGTGGCACCCTTCCTTTTGATGATGAAAATATTCCAAACCTTTTCAAGAAAATAAAGGGTGGGATATACACTCTTCCTAGTCATTTATCACCTGGTGCTAGAGATCTGATACCCAGGATGCTTGTGGTTGATCCTATGAAAAGGATGACCATACCTGAGATCCGTCAACACCCATGGTTCCAAGCTCATCTCCCTCGTTATTTGGCAGTGCCACCACCCGATACTTTACAACAAGCCAAAAAGATTGACGAGGAAATTCTTCAGGAAGTGGTTAATTTTGGATTTGATAGGAATCAGTTGGTTGAATCTCTTCGCAACAGGATACAAAATGAGGCTACTGTGACATATTATTTGCTATTGGACAATCGATTCCGTGTTTCAAGCGGCTATCTTGGTGCTGAGTTTCAAGAGAGTATGGATACTGGTTATAATCGTATGCATGCTAGTGAAGTTGCTGCTCCAGCGGTTGGGAACCGCTTTCCTGGAGGATATATGGATTATCAAGGAGCTGGATTGAGGCCACAGTTCCCTGCTGAGAGAAAATGGGCCCTTGGGCTTCAGTCTCGGGCCCATCCTCGCGAAATAATGACTGAGGTCCTTAAAGCTCTGCAAGAATTGAATGTGTGCTGGAAGAAGATTGGACACTATAACATGAAGTGCCGCTGGGTGGCTGGCATTCTGGGTCGTAGTGAAGGAATGATGAACAATCATAATCATTACTTTGGAGATGAATCCGCTATTATTGAGAATGATGCGGTTTCTAAGTCAAACATAGTCAAGTTTGAAATGCAGCTTTACAAAACCCGTGAAGAGAAGTATCTGCTTGATCTCCAAAGGGTCCATGGCCCACAGTTTCTCTTCCTGGATCTTTGTGCTTCTTTCCTGGCACAGCTACGTGTCCTCTAG 1536 0.4271 MDGSGRGSAGVDMYLPNYKLGKTLGIGAFGKVKIAEHVLTRHKVAIKILNKRKVKNMEMEEKVRREIKILRLFMHPHIIRLYEVIETPTDIFVVMEYVKSGELFDYIVEKGRLQEDEARIFFQQIISGVEYCHRNMVAHRDLKPENLLLDSKCSVKIADFGLSNVMIDGHFLKTSCGSPNYAAPEVISGKYYAGPEVDVWSCGVILYALLCGTLPFDDENIPNLFKKIKGGIYTLPSHLSPGARDLIPRMLVVDPMKRMTIPEIRQHPWFQAHLPRYLAVPPPDTLQQAKKIDEEILQEVVNFGFDRNQLVESLRNRIQNEATVTYYLLLDNRFRVSSGYLGAEFQESMDTGYNRMHASEVAAPAVGNRFPGGYMDYQGAGLRPQFPAERKWALGLQSRAHPREIMTEVLKALQELNVCWKKIGHYNMKCRWVAGILGRSEGMMNNHNHYFGDESAIIENDAVSKSNIVKFEMQLYKTREEKYLLDLQRVHGPQFLFLDLCASFLAQLRVL 511
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Accr5g01376 511 Gene3D Transferase(Phosphotransferase) domain 1 9 350 - -
Accr5g01376 511 FunFam Non-specific serine/threonine protein kinase 9 348 - -
Accr5g01376 511 ProSiteProfiles Ubiquitin-associated domain (UBA) profile. 291 331 IPR015940 -
Accr5g01376 511 CDD UBA_SnRK1_plant 292 332 - -
Accr5g01376 511 ProSitePatterns Serine/Threonine protein kinases active-site signature. 137 149 IPR008271 GO:0004672|GO:0006468
Accr5g01376 511 SMART serkin_6 18 270 IPR000719 GO:0004672|GO:0005524|GO:0006468
Accr5g01376 511 CDD STKc_AMPK_alpha 15 270 - -
Accr5g01376 511 SMART uba_6 293 330 IPR015940 -
Accr5g01376 511 SUPERFAMILY Protein kinase-like (PK-like) 15 288 IPR011009 -
Accr5g01376 511 FunFam Non-specific serine/threonine protein kinase 395 509 - -
Accr5g01376 511 SUPERFAMILY KA1-like 327 510 IPR028375 -
Accr5g01376 511 Pfam UBA/TS-N domain 292 328 IPR015940 -
Accr5g01376 511 Gene3D Kinase associated domain 1, KA1 395 509 - -
Accr5g01376 511 ProSitePatterns Protein kinases ATP-binding region signature. 24 47 IPR017441 GO:0005524
Accr5g01376 511 Pfam Protein kinase domain 18 270 IPR000719 GO:0004672|GO:0005524|GO:0006468
Accr5g01376 511 Pfam Kinase associated domain 1 468 510 IPR001772 -
Accr5g01376 511 ProSiteProfiles Kinase associated domain 1 (KA1) profile. 462 510 IPR001772 -
Accr5g01376 511 ProSiteProfiles Protein kinase domain profile. 18 270 IPR000719 GO:0004672|GO:0005524|GO:0006468
Accr5g01376 511 CDD AMPKA_C 389 508 - -
Accr5g01376 511 FunFam Non-specific serine/threonine protein kinase 7 99 - -
Accr5g01376 511 PANTHER MAP/MICROTUBULE AFFINITY-REGULATING KINASE 17 313 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Accr5g01376 Accr-Chr5 39720307 39724878 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Accr5g01376 18 271 CBL-interacting serine-threonine protein kinases AT2G26980 52.529 5.57e-90 280
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK CAMK_AMPK Accr5g01376 Pkinase 1.5e-78 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Accr5g01376 K07198 - gmx:100796687 932.554