Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Accr5g01375 ATGGCCGCGAAGAACGGCGGATCCGCTACGGCGCAACCGCCACGCCCGACGATCACTCTCCCGCCTCGCCCTTCCATGGAGGTCTTCTTCAACGGTGGCCCTGGCGCTAGCCCAGGCCCGATGACCCTCGTATCCAGCTTCTTCTCTGATAATTATCCTGACTCTGACTGTCGGTCGTTTTCTCAGTTGCTCGCCGGAGCTATGGCTTCTCCGCTTGCTCGCGGTCCGAGGCCTGGCTTCTTTCCGGATAATTTGATCGACAATTCCTCCAAAGAAGCTACTGCTGAGGATGGGGCCCAAAAGAATTCGGGTTTCAAGCAGAGTAGGCCCATCAATCTGGCTATTGCTCGTTCACCATTGTTTACCGTTCCACCTGGGTTAAGCCCTTCTGGGTTGCTCAACTCACCGGGCTTCTTTCCGCCGCAGAGCCCCTTTGGGATATCCCATCAGCAGGCTTTAGCACAGGTTCAAGCTCAAGCTGTCCTGGCACAATCTCATATGCACATGCAAGGTGATCATCAACAACCTGCCATAACGGCTCCTGGTGAACCATTGGCACAGCAGCCATCTTTTGTTCCAAGTGAAGCTTCAGACCAGCAAGTGGCACCATCTGCATCAGATTCTAAAAGTGCTCAAATGGAGACTTCAGATGTTTCTCACACTGATAAGAAATACCAACCTTCTTCCTTAGCCATTGATAAACCTGCAGATGATGGCTACAATTGGCGTAAGTATGGGCAGAAGCAGGTTAAAGGGAGTGAGTACCCGCGGAGCTACTACAAGTGTACACATCTGAATTGCCCAGTGAAGAAAAAGGTTGAGCGTGCCCCTGACGGTCACATAACTGAAATTATCTATAAAGGCCAGCATAATCATGAACTGCCTCAGCCAAACAAGCGTATCAAAGATAATTCTGATGTAAATGGAAATACAAGTGTTCAAGTTCAGTCTGACTCGACTACACAAGGATGGGTGGGAAATTTAAACAAGTTTGGTGAAAGCATGCCTGATCATTCAGTGCCAGAAAGTGATCCCTCATCCAATCAAGGTGCTCTCAAGCAACTACCTGGATCAAGTGAGAGCGAGGAAGGGGGTGATGCTGATATAAGGGAAGAGGAGGGAGATGTCAGCGAGCCCAACCCCAAGAGAAGGAACACTGATCTTGGGGCTTCTGAAGTACCTATGTCTCACAAGACTGTCACGGAACCCAAAATCATTGTGCAAACAAGAAGCGAAGTTGATCTTCTGGATGATGGTTACAGGTGGCGCAAGTATGGGCAAAAAGTGGTAAAGGGAAATCCCTATCCAAGGAGTTATTACAAATGCACTAGTGCAGGATGCAATGTGCGTAAGCATGTTGAGAGGGCTTCAACAGACCCCAAAGCTGTCATAACTACCTATGAAGGAAAACATAACCATGATGTTCCTGCTGCTAAAACCAGCAGCCACAACACAGCTAATAGCAATTCAATGCAGGTAAAACCACAGAGAGTGGTGCCTGAGAAGCATCCTTTGCTTAAAGATATGGATTTTGGAAATAATGACCAAAGACCAGTCGCATTACGCTTTAAAGAAGAGCAAATCATTGTATAG 1593 0.4815 MAAKNGGSATAQPPRPTITLPPRPSMEVFFNGGPGASPGPMTLVSSFFSDNYPDSDCRSFSQLLAGAMASPLARGPRPGFFPDNLIDNSSKEATAEDGAQKNSGFKQSRPINLAIARSPLFTVPPGLSPSGLLNSPGFFPPQSPFGISHQQALAQVQAQAVLAQSHMHMQGDHQQPAITAPGEPLAQQPSFVPSEASDQQVAPSASDSKSAQMETSDVSHTDKKYQPSSLAIDKPADDGYNWRKYGQKQVKGSEYPRSYYKCTHLNCPVKKKVERAPDGHITEIIYKGQHNHELPQPNKRIKDNSDVNGNTSVQVQSDSTTQGWVGNLNKFGESMPDHSVPESDPSSNQGALKQLPGSSESEEGGDADIREEEGDVSEPNPKRRNTDLGASEVPMSHKTVTEPKIIVQTRSEVDLLDDGYRWRKYGQKVVKGNPYPRSYYKCTSAGCNVRKHVERASTDPKAVITTYEGKHNHDVPAAKTSSHNTANSNSMQVKPQRVVPEKHPLLKDMDFGNNDQRPVALRFKEEQIIV 530
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Accr5g01375 530 FunFam WRKY transcription factor 33 403 469 - -
Accr5g01375 530 SUPERFAMILY WRKY DNA-binding domain 408 476 IPR036576 GO:0003700|GO:0006355|GO:0043565
Accr5g01375 530 Gene3D WRKY domain 401 477 IPR036576 GO:0003700|GO:0006355|GO:0043565
Accr5g01375 530 Gene3D WRKY domain 224 296 IPR036576 GO:0003700|GO:0006355|GO:0043565
Accr5g01375 530 MobiDBLite consensus disorder prediction 473 497 - -
Accr5g01375 530 MobiDBLite consensus disorder prediction 301 328 - -
Accr5g01375 530 ProSiteProfiles WRKY domain profile. 231 295 IPR003657 GO:0003700|GO:0006355|GO:0043565
Accr5g01375 530 MobiDBLite consensus disorder prediction 1 34 - -
Accr5g01375 530 MobiDBLite consensus disorder prediction 164 241 - -
Accr5g01375 530 FunFam WRKY transcription factor 223 296 - -
Accr5g01375 530 MobiDBLite consensus disorder prediction 340 356 - -
Accr5g01375 530 MobiDBLite consensus disorder prediction 190 215 - -
Accr5g01375 530 MobiDBLite consensus disorder prediction 478 495 - -
Accr5g01375 530 ProSiteProfiles WRKY domain profile. 411 476 IPR003657 GO:0003700|GO:0006355|GO:0043565
Accr5g01375 530 PANTHER WRKY TRANSCRIPTION FACTOR PROTEIN 1-RELATED 138 492 IPR044810 GO:0003700
Accr5g01375 530 SMART WRKY_cls 236 294 IPR003657 GO:0003700|GO:0006355|GO:0043565
Accr5g01375 530 SMART WRKY_cls 416 475 IPR003657 GO:0003700|GO:0006355|GO:0043565
Accr5g01375 530 MobiDBLite consensus disorder prediction 287 399 - -
Accr5g01375 530 Pfam WRKY DNA -binding domain 237 293 IPR003657 GO:0003700|GO:0006355|GO:0043565
Accr5g01375 530 Pfam WRKY DNA -binding domain 417 473 IPR003657 GO:0003700|GO:0006355|GO:0043565
Accr5g01375 530 SUPERFAMILY WRKY DNA-binding domain 235 295 IPR036576 GO:0003700|GO:0006355|GO:0043565
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Accr5g01375 Accr-Chr5 39693588 39697777 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Accr5g01375 15 528 WRKY Transcription Factor Family AT2G03340 53.008 1.78e-154 449
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF WRKY Accr5g01375 WRKY 1.3e-25 CL0274
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Accr5g01375 - - qsa:O6P43_004445 796.578