Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Accr5g01370 ATGCCCGCTCTCTTCTCTCTCCCTAGGTGCTTGGGAACTTATTCTCGGAGTAGCAGCGGCAGCGGTGACAGTGGCCACGACGTCGTCGCCGACGACACTACTACTAGTCCAAACGCCAATTCTTCGTCCGTCGAGTGCTATGCCTGCACTCAGGGGGGCGTCGTCCCCGTGTTCCACTCAACCAGCTGCGACAGCTATCACCCGCCGCAATGGGAGGCTTCTGCGGGCTCTTACTTAATCCCTATCCAGAACAAAACCGCGGCGAAGAATAATCCGAGGCAGCAACCCAAATCGGGGCCGTTCGGGTCAGTGTTGGACCCGAGAAGCAAGCGCGTGCAGAGGTGGAACAGGACGCTGCTGCTGGCGCGAGGGGTGGCGCTGGCGGTGGACCCATTATTCTTCTATGCTCTGTCAATAGGGAGGGACGGCACGCCGTGCCTGTACATGGACGGCAGTTTAGCGACGATAGTGACGGTGGTGAAGACGTTGGTGGATGTGGTTCACGTGTTCCACGTGTGGTTGCAGTTCAGGCTGGCGTACGTGTCGAAGGAATCCATGGTGGTTGGTTGTGGGAAGCTGGTTTGGGACGCGCGTACCATCGCCGCGCATTACCTGAGGTCCTTCGGAGGCTTCTGGTTCGACGCCTTTGTTATACTTCCCGTTCCTCAGGCGGTGTTTTGGCTGGTTTACCACAGCATCTGTATGATGAGGAGGATGCAAAAAGTCACGGGCTATATCTTCGGCACCATTTGGTGGGGCTTTGGCCTCAACCTCATAGCCTACCTTATTGCTTCTCACGTAGCAGGAGGGTGCTGGTATGTGCTTGCAATTCAACGAGTAGCGGCGTGCCTGAGGCAGCAGTGTGAAAGAGGGTATGGATGTGATCTCCCTCTGTCATGTTCAGATGAAGTGTGTTTCAAGTTTCTGTCACCAACAGGCACAGAAGGAACTTCATGTAATGGAAGCCTCACAACAGTTGTGGCAAGAAAGCCATTGTGTTTAGATGCGCATGGACCTTTTAAATATGGGATCTACCAATGGGCTCTCCCAGTCATTTCCAGCAACTCTTTGGCTGTCAAGATACTTTATCCCATATTTTGGGGTTTGATGACCCTCAGCACTTTTGGCAATGATCTTGAGCCTACGAGTAACTGGCTAGAAGTGATTTTCAGCATATGCATGGTACTCAGCGGACTAATGCTCTTCACTCTGTTGATTGGTAACATCCAGGTATTCTTACACGCAGTAATGGCGAAAAAGAGAAAGATGCAGCTGAGATGTCGTGACATGGAATGGTGGATGAGGAGGAGGCAGCTTCCGTCCCATTTAAGACAGAGAGTTCGCCAGTTTGAACGCCAGAGATGGGCAGCCATGGGAGGAGAGGACGAAATGGAATTGGTCAAAGACTTCCCTGAAGGATTGAGGAGAGACATCAAGCGTTATCTTTGCCTAGACCTCATCAAAAAGGTTCCTCTGTTTCACAACTTGGATGATCTTATCCTTGACAACATCTGTGATAGGGTTAAACCCCTAGTCTTCTCTAAAGATGAAAAGATAATTAGGGAAGGGGACCCAGTGCCAAGAATGGTATTCATAGTTTGCGGGCGCATAAAACGCATGCAAAGCCTAAGCAAAGGCATTGTGGCCACAAGCGTCATCGAAGCTGGGGGATTTTTGGGGGATGAACTTCTCTCCTGGTGCCTTCGCCGGCCGTTCCTTGACCGACTTCCGGCATCCTCCGCCACGTTCTTATGCCTGGAATCAGCAGAAGCTTTTGGGTTGGAGGCAGGTCACCTCAAGTACGTGACGGACCACTTCAGATACAAGTTTGCCAACGAGAGGCTGAAGAGAACGGCGAGATATTACTCGTCGAATTGGAGAACGTGGGCTGCCGTGAACATACAGCTTGCATGGCGGCGATACAGGCAGAGGACGAGAGGTCCAGTGACCCCTGTGATCGAACGTGGAGGACGAATTAGTACAGAACGCAGGCTCTTGCAGTATGCTGCTATGTTCATGTCAATAAGGCCACATGACCACCTTGAATGA 2049 0.5188 MPALFSLPRCLGTYSRSSSGSGDSGHDVVADDTTTSPNANSSSVECYACTQGGVVPVFHSTSCDSYHPPQWEASAGSYLIPIQNKTAAKNNPRQQPKSGPFGSVLDPRSKRVQRWNRTLLLARGVALAVDPLFFYALSIGRDGTPCLYMDGSLATIVTVVKTLVDVVHVFHVWLQFRLAYVSKESMVVGCGKLVWDARTIAAHYLRSFGGFWFDAFVILPVPQAVFWLVYHSICMMRRMQKVTGYIFGTIWWGFGLNLIAYLIASHVAGGCWYVLAIQRVAACLRQQCERGYGCDLPLSCSDEVCFKFLSPTGTEGTSCNGSLTTVVARKPLCLDAHGPFKYGIYQWALPVISSNSLAVKILYPIFWGLMTLSTFGNDLEPTSNWLEVIFSICMVLSGLMLFTLLIGNIQVFLHAVMAKKRKMQLRCRDMEWWMRRRQLPSHLRQRVRQFERQRWAAMGGEDEMELVKDFPEGLRRDIKRYLCLDLIKKVPLFHNLDDLILDNICDRVKPLVFSKDEKIIREGDPVPRMVFIVCGRIKRMQSLSKGIVATSVIEAGGFLGDELLSWCLRRPFLDRLPASSATFLCLESAEAFGLEAGHLKYVTDHFRYKFANERLKRTARYYSSNWRTWAAVNIQLAWRRYRQRTRGPVTPVIERGGRISTERRLLQYAAMFMSIRPHDHLE 682
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Accr5g01370 682 ProSiteProfiles cAMP/cGMP binding motif profile. 492 571 IPR000595 -
Accr5g01370 682 PANTHER CYCLIC NUCLEOTIDE-GATED ION CHANNEL 15-RELATED-RELATED 93 645 - -
Accr5g01370 682 Gene3D Helix hairpin bin 418 483 - -
Accr5g01370 682 SUPERFAMILY Voltage-gated potassium channels 106 413 - -
Accr5g01370 682 CDD CAP_ED 492 599 IPR000595 -
Accr5g01370 682 MobiDBLite consensus disorder prediction 14 39 - -
Accr5g01370 682 Gene3D Jelly Rolls 490 608 IPR014710 -
Accr5g01370 682 Pfam Ion transport protein 115 410 IPR005821 GO:0005216|GO:0006811|GO:0016020|GO:0055085
Accr5g01370 682 SUPERFAMILY cAMP-binding domain-like 419 605 IPR018490 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Accr5g01370 Accr-Chr5 39650753 39654447 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Accr5g01370 42 682 Ion Channels AT5G15410 73.382 0.0 987
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Accr5g01370 K05391 - qsa:O6P43_004432 1087.02