LGRPv2

Gene search

Sequence information

Select	Gene	Cds	Cds_length	GC_content	Pep	Pep_length
	Accr5g01345	ATGGCTACAGAGGAATCTGATTCTAAGCATGTCCTGCCTGAGCTAGAGAATGAAGAAGATTTAATTGCTGCAGCAAAGGACATTGTGAGGGCTTTAGGGTCGAACAGGAACCTCACAATTGATGCCAAGAAAATTCTGGCTGATCTTGGAACCCGTTTGGCCTCTATGACTGAACCCTGTGAGAAGAAGGAGGGAGATGAAGGGGAAGGTGGCCAAGAAGAAGAAGAGGAAAAAGAAGTGAGTGCAGTTGAAGATCGGCTCAATATCATTGAGGAGAAAATTATGAGGTGGGAAGAAGATAGGTCTTGGATTTGGGATTCGGGACCCGATGAAATATCAGAATATCTGGCTGCAGCTGATGAAGCACGCCAATTGATTGAAAAGTTGGAGAGGTCAGATTTGAAAAGAGATGATCAAGAGTACAAGTCCTTGCTGAGAGCTTACAGCGTTCTCCAAACAGCCATGGCCCGGCTTGAGGAAGAGTTCATGAACTTACTCATCCAGTACAAGCAACCCTTTGAGCCCGAATACATGTCTTTTCGATCTTCCGAAGATGATCCGGTTGATGAGGGCTTTATAGTCCCTTCGGTTGATGACTCAACCGAGGAGTCACTGCCAAGAGAAAGTGTGGTGAGCAGAGGCTCTGAGGAGCATATAATTGATTTAGTCCATCCTCATGTGATCCCTGAACTCAGGAGTATTGCACAGCAAATGTTTGATTCAAAGTATGACCGAGAATGTTCCCATGCCTATACCGTTGCCCGAAGGGAATCCTTGGAGGAGTGTCTCGTGATTCTTGAAATGGAAAGGCTGAGCATCGAGGATGTGTTGAAAATGCAGTGGGGTACTCTGAATTCCAAGATCAAAAGATGGGTTTGGGCAGTGAAAATCTTTGTCAGGGTTTATCTTGCAAGTGAGAAGTGGCTAAGTGACCAGATTTTTGGGGAGGGTGAACCGGTTAGTATCTCTTGCTTTATTGATGCATCAAAAGCCTCAATATTTCAGCTTCTGACCTTTGGTGATGCCATGTCCATTGGCCCCCACCAGCCTGAGAAACTGTTCCGTGGTCTTGACATGTATGAGGCCCTAGCCGAGCTCATTCCAGAGATAGATGCTTTGTATCCACACGAGGTTGGTTCTTCTGTTAGAATTGAATGCCACGAAGTTTTAACGAGACTAGGTGATTGTGTGAAGTTAACATTCCTTGAATTTGAAAATGCTATTGCAACGAATGCATCTACCAACCCTTTTGTGGGTGGTGGAATCCATCCTTTAACCAGGTATGTCATGAATTATTTGAACACTCTCGCTGACTATGGTGAGACCCTTAATTTTCTCCTGAAGAACAAAGAAGAAGATGATACCATTTTGCTGTCGCCTGACATGAGCCCAGATGCCGAAGAAAATAGCAAGTTTCCGGGGTCTCCCAGTGGAGTTTCCTCGATGGCCCTACACTTCCGATCAGTTGCTTCCATCCTTCAATGCAAACTCGATGAGAAGTCCAAGTTATACAGGGACGCTGGCTTGCAGCACTTATTCTTGATGAACAATATACACTACATGGCTCAGAAGGTTAAGGGGTCAGAACTTAGGCTCATATATGGAGATGAATGGATTCGAAAGCATAACTGGAAGTTTCAGCAACATGCCATGAGCTACGAAAGGGCTAGTTGGAGTTCCATTCTCTCCTTGCTTAAGGATGATGTTCATGCTTCTATCTCAAAAAGTCCTCTGAAGGAGAACTTACAGAGATTCTATCTTGCCTTCGAGGATGTTTATAAGAGCCAAACAGCTTGGTCTATCCCTGACGTGCAGCTTCGTGAAGACTTGAGGATCTCTATATCCCTAAAAGTGATTCATGCTTATAGGACCTTTGTAGGGAGGCATAGTCATCACATAAGTGACAAACACGTGAAGTACAATGCTGATGATCTAGAAAATTACCTTTTGGATTTCTTTGAAGGATCTCCAAAATCGCTGCAAAATCCTCATAGGAGGTAA	2001	0.4433	MATEESDSKHVLPELENEEDLIAAAKDIVRALGSNRNLTIDAKKILADLGTRLASMTEPCEKKEGDEGEGGQEEEEEKEVSAVEDRLNIIEEKIMRWEEDRSWIWDSGPDEISEYLAAADEARQLIEKLERSDLKRDDQEYKSLLRAYSVLQTAMARLEEEFMNLLIQYKQPFEPEYMSFRSSEDDPVDEGFIVPSVDDSTEESLPRESVVSRGSEEHIIDLVHPHVIPELRSIAQQMFDSKYDRECSHAYTVARRESLEECLVILEMERLSIEDVLKMQWGTLNSKIKRWVWAVKIFVRVYLASEKWLSDQIFGEGEPVSISCFIDASKASIFQLLTFGDAMSIGPHQPEKLFRGLDMYEALAELIPEIDALYPHEVGSSVRIECHEVLTRLGDCVKLTFLEFENAIATNASTNPFVGGGIHPLTRYVMNYLNTLADYGETLNFLLKNKEEDDTILLSPDMSPDAEENSKFPGSPSGVSSMALHFRSVASILQCKLDEKSKLYRDAGLQHLFLMNNIHYMAQKVKGSELRLIYGDEWIRKHNWKFQQHAMSYERASWSSILSLLKDDVHASISKSPLKENLQRFYLAFEDVYKSQTAWSIPDVQLREDLRISISLKVIHAYRTFVGRHSHHISDKHVKYNADDLENYLLDFFEGSPKSLQNPHRR	666

Annotation information

Select	Seq ID	Length	Analysis	Description	Start	End	IPR	GO
	Accr5g01345	666	Pfam	Exo70 exocyst complex subunit	289	650	IPR046364	GO:0000145\|GO:0005546\|GO:0006887
	Accr5g01345	666	Coils	Coil	112	132	-	-
	Accr5g01345	666	Gene3D	Exocyst complex component Exo70	97	662	-	-
	Accr5g01345	666	SUPERFAMILY	Cullin repeat-like	103	654	IPR016159	-
	Accr5g01345	666	Coils	Coil	73	100	-	-
	Accr5g01345	666	MobiDBLite	consensus disorder prediction	55	82	-	-
	Accr5g01345	666	Coils	Coil	141	168	-	-
	Accr5g01345	666	PANTHER	EXOCYST COMPLEX PROTEIN EXO70	78	655	IPR004140	GO:0000145\|GO:0006887

Duplication type information

Select	Gene	Chromosome	Start	End	Duplicated_type
	Accr5g01345	Accr-Chr5	39367646	39369646	Wgd

Functional genes information

Select	Gene	Gene_start	Gene_end	Function	Ath_gene	Identity(%)	E-value	Score
	Accr5g01345	14	666	EXO70 exocyst subunit family	AT3G29400	48.507	0.0	572

Pathway information

Select	Query	KO	Definition	Second KO	KEGG Genes ID	GHOSTX Score
	Accr5g01345	K07195		-	gmx:100799102	946.036