Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Accr5g01343 ATGAAGCAAAAACAGATCTTTTTTCATTTGGCGCTCATCCTCTGCTACTTCATGGTGGTGCTTGTCAGAGGCATGGAAGTTGCAGAAGAAGCTGATAGGATCGTGGAACTTCCTGGGCAACCAAAAGTCTCTTTCCAACAATTCTCAGGCTATGTCACTGTCAATCACGTTGCTGGTAGAGCCCTCTTTTACTGGCTCACTGAATCCCCACAAAACCCCTTCTCCAAGCCCCTCGTCATTTGGCTCAATGGAGGTCCGGGTTGTTCATCGGTGGCGTACGGAGCATCCGAGGAGATAGGCCCGTTCAGAATCAATAGGACGGCTTCTGGACTGTACCTTAACAAGTTCTCTTGGAACTCCGTCGCCAACCTCCTCTTCTTGGAGGCTCCGGCCGGTGTCGGCTTCTCCTATTCCAACCGCTCCTCCGATCTCTACGACACCGGCGACCACCGCACCGCGAAGGACTCTCTGGAATTCATAATAAGGTGGCTAGAACGATTCCCAAGGTACCAGGATCGGGAACTTTATATCAGTGGAGAGAGCTACGCAGGCCATTATGTTCCACAATTAGCAAGAGAAATCATCACGTATAATGCAAAAGCCAAGCACCCAATCAATATCAAAGGAATTTTGGTTGGGAATGCAGTGACGGACAATTACTATGATAACCTGGGGACGGTGACGTACTGGTGGAGCCACGCAATGATCTCCGACCAGACTTACAGGCAGCTCATGAGCACGTGCGATTTCCACCGGCAAAAGGAATCCGATGAGTGTGAGTCCTTGTATAGCTACGCCATGGACCAAGAATTCGGTAACATTGATCAGTATAACATCTATGCTCCTCCGTGCAACAACTCTGACGGCAGCTCCGCCACCACCCGCCGCTCCATGCGCCTGCCCCACCGTCCCCATCATCCGATGTTTAGGCAAATGTCTGGGTATGATCCCTGCACAGAGAAGTATGCTGAGATATACTACAACAGGCCAGATGTTCAGAAAGCACTCCATGCCAACACAACGGCCATTCCTTACAAGTGGACTGCTTGCAGTGAGGTTCTGAATCGAAACTGGAACAATACAGATGCGTCCATACTTCCCATTTACAGGGAGTTGATAGCACATGGAACCAGAGTCTGGGTTTTCAGTGGGGATGTTGATTCGGTTGTGCCAGTTACAGCAACTAGATATTCCCTTGCTCAGCTTAAGTTGGCGACCAAGATTCCTTGGTATCCTTGGTACGTCAAAAGGCAGGTTGGAGGGTGGACAGAGGTGTACCAAGGGCTTACGTTTGCAACAGTAAGAGGGGCTGGTCATGAAGTGCCACTGTTCAAGCCCAGAGCTGCTCTCCAGTTATTCAAATCATTCATTGCAGGCAAACCTCTTCCCAAGTCCTAA 1398 0.4993 MKQKQIFFHLALILCYFMVVLVRGMEVAEEADRIVELPGQPKVSFQQFSGYVTVNHVAGRALFYWLTESPQNPFSKPLVIWLNGGPGCSSVAYGASEEIGPFRINRTASGLYLNKFSWNSVANLLFLEAPAGVGFSYSNRSSDLYDTGDHRTAKDSLEFIIRWLERFPRYQDRELYISGESYAGHYVPQLAREIITYNAKAKHPINIKGILVGNAVTDNYYDNLGTVTYWWSHAMISDQTYRQLMSTCDFHRQKESDECESLYSYAMDQEFGNIDQYNIYAPPCNNSDGSSATTRRSMRLPHRPHHPMFRQMSGYDPCTEKYAEIYYNRPDVQKALHANTTAIPYKWTACSEVLNRNWNNTDASILPIYRELIAHGTRVWVFSGDVDSVVPVTATRYSLAQLKLATKIPWYPWYVKRQVGGWTEVYQGLTFATVRGAGHEVPLFKPRAALQLFKSFIAGKPLPKS 465
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Accr5g01343 465 Gene3D - 365 459 - -
Accr5g01343 465 FunFam Carboxypeptidase 314 462 - -
Accr5g01343 465 Gene3D - 318 355 - -
Accr5g01343 465 PANTHER SERINE PROTEASE FAMILY S10 SERINE CARBOXYPEPTIDASE 35 446 IPR001563 GO:0004185|GO:0006508
Accr5g01343 465 FunFam Carboxypeptidase 28 286 - -
Accr5g01343 465 ProSitePatterns Serine carboxypeptidases, histidine active site. 429 446 IPR033124 GO:0004185
Accr5g01343 465 SUPERFAMILY alpha/beta-Hydrolases 36 463 IPR029058 -
Accr5g01343 465 ProSitePatterns Serine carboxypeptidases, serine active site. 177 184 IPR018202 GO:0004185
Accr5g01343 465 PRINTS Carboxypeptidase C serine protease (S10) family signature 429 442 IPR001563 GO:0004185|GO:0006508
Accr5g01343 465 PRINTS Carboxypeptidase C serine protease (S10) family signature 114 126 IPR001563 GO:0004185|GO:0006508
Accr5g01343 465 PRINTS Carboxypeptidase C serine protease (S10) family signature 163 188 IPR001563 GO:0004185|GO:0006508
Accr5g01343 465 PRINTS Carboxypeptidase C serine protease (S10) family signature 127 137 IPR001563 GO:0004185|GO:0006508
Accr5g01343 465 Gene3D alpha/beta hydrolase 28 286 IPR029058 -
Accr5g01343 465 FunFam Carboxypeptidase 365 459 - -
Accr5g01343 465 Pfam Serine carboxypeptidase 39 458 IPR001563 GO:0004185|GO:0006508
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Accr5g01343 Accr-Chr5 39332675 39336755 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Accr5g01343 323 462 Calmodulin-binding Proteins AT2G22960 30.496 1.29e-14 70.5
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Accr5g01343 K16297 - gmx:100807680 833.172