Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Accr5g01339 ATGTTTCCTTCTTCCTGTACTTCACTGATCAAATGGCGTTTCTTTCACAAGCCTATGTCCCCCTTGCTTCTTCTGGAATTCTACTTTCTCTTATGGGTCCTCTTCCCGTCTTGTAGTGATGCCTTTCTCGCCGATTCCGACAAATCAGCGCTTCTTCATTTCAAGAGTTCTGTCTCTGATCCATCGGGGCTGCTTTCGAGCTGGAATTCGGCCGGAGATTCCAATCACTGTTCTTGGTTCGGCGTTCTCTGCGACTCGAATTCGCGGGTTGTCGCCCTCAACATTTCCGGAAATGGTGGTGAAAGTAATCGAAGCTCTTCTCCGTGTTCTGATTCTGCGAAATTTCCACTTTATGGGTTTGGAATTAGGAGGAGCTGTGACGGCAGTAGAGGAGCATTGTTTGGGAAGTTTTCGCCTCTGATCAGTAAGCTTACTGAGCTCAGGATTCTGTCACTTCCTTTTAACGGTTTTGAGGGTGAAATTCCTCCGGAAATTTGGGGCATGGGCAAGTTGGATGTTCTCGACCTAGAGGGGAACTCCATAACTGGGTCACTTCCGTCTCATTTTGATGGCTTGAGGAACTTGCGAGTTCTTAACCTCGGGTTTAATAATATTGTCGGGGAGATACCAGACTCGCTTGCACGTCTTGAAAGTTTGGAAATTTTGAATTTAGCTGCGAATGGCTTGAATGGATCTGTTCCTGGGTTCATCGGTAAGCTGAAGGGGGTGTATCTACTGTTTAATCTGCTTAGTGGGCCTATACCACTTGAGATCGGGGATAACTGTGGGAAGCTTGAACATCTGGATTTGTCAGGTAACTTCTTAGTCCAGCGAATTCCAAGCAGTTTGGGAAACTGTAGTCAATTACGGTCACTTTTGTTGTATTCAAATTTGTTGGAAGAGGTAATTCCTTCCGAACTCGGTAAACTTCAGCTGCTTGAAGTGTTGGATGTTTCAAGAAATGCTCTCAGTGGTCCAGTACCTCCAGAAATTGGGAATTGCTCAGAGCTGTCTGTCCTTGTGCTATCAAATCTTTTCAATCCACTTCCTGAAGCCAACAATACTGTAAGGGAATCTTCGCAATTGGTTTCTATAAATGATGAATTAAATTATTTTGAAGGTGCCATGCCTGTGGAAATTACATCCCTCGCAAAGCTGAGAATATTATGGGCACCAAGGGCAACTCTGGAAGGTCTTTTCCCAAGCAGTTGGGGTGCTTGTGATAACTTGGAGATGGTGAACTTGGCTCAGAATTATTTCAATGGCGAATTTCCCAATCAGCTTAGTGGCTGCAAGAAGCTGCATTTTCTTGATTTGAGCTCGAACAACCTTACTGGAGAGCTTGCTGAAGAACTTCATGTTCCTTGTATGACTGTGTTTGATGTCAGTGGGAATATCTTGTCTGGTTCAATTCCTGAATTTTTTAATGGTACTTGTTCTTCAGTTCCTTCCTGGAATGGCACTCTGTTTGAACTTGACAATGTCTCAATTCCATATATGTCATTTTTTTCAACAAAGGTTCATGATGGACCCCTTTTGACTTCAGCGGGAGAAGTTGGTCTGTCAGTTATTCACAATTTTGGGAACAACAATTTTACTGGCATGCAGTCATTGCCCATAGCACATGACAGATTGGGTAGAAAGATGGGTTATGCATTACTTGTCGGAGAAAATAAGCTTACAGGGCCGTTTCCTGCCAACTTATTTGATAAGTGTGATGGATTAGATGCATTGCTCTTAAATGTCAGTTATAATAGGTTATCTGGTCAGATTCCTGCTAAGTTTGGCGGAATGTGCGGGTCATTAAAATTTTTGGATGCATCAGGGAATCGGATAGCTGGACCAGTTCCTGTTGGTTTGGGGGAATTGGTATCTCTTGTTTCTCTAAACCTTGGTTGGAATCAGTTACAAGGTTCGATTCCTACCAGCCTTGGCCAGATGAAAAATTTGGTGTTTCTTTCCATGGCCTCTAATAACTTAACTGGCTCTATTCCTACCAGCCTGGGGCAGTTGTACTCTTTAAAAGTTTTGGATCTTTCATCTAATTCTCTCACGGGTGAGATTCCAATGGGTTTTGAGAACTTGAGAAATCTGACTGGTCTTCTTCTCAACAACAACAAACTTTCTGGACATATCCCTTCTGGTCTGGCAAATGTCACTACACTCTCAGCATTTAACGTGTCCTTCAATAACTTGTCTGGATCATTGCCATCAGATAATAACTTGTTGAAATGCAGTAGTGCTGTTGGGAATCCATTTTTACGTCCTTGCCATATGCTTTCTTTGACCACAACATCAACAGATCCACAAGGGAAGGTACCTGATTATAATTATAATTCTGCTCCACCACCAGAAACTGCCAGCAAAGGTAGTGGGTCGGGCTTCAATTCTATTGAAATAGCATCTATATCGTCTGCATCAGCCATCGTTTCTGTTCTTATAGCCCTAATAATTCTGTTCTTTTATACCCGTAAGTGGAACTCCAGGTCCAGGGTTGTTGGTTCCACAAGAAAAGAAGTTATTGTTTTTACTGATATTGGGGTCCCATTGACTTTTGAAACTGTCGTTCGTGCCACTGGTAATTTCAATGCAAGCAATTGTATTGGAAATGGAGGATTTGGTGCAACCTACAAGGCAGAGATAGCACCAGGAAATCTAGTGGCTATAAAACGTCTGTCAGTAGGACGATTCCAAGGTGTTCAACAATTTGATGCAGAGATTAAAACCCTCGGAAGACTTCGCCATCCAAATCTTGTCACTTTGTTTGGTTACCATGCCAGTGAGACAGAGATGTTTCTGATATACAACTATTTGCCGGGTGGGAACCTGGAAAAGTTTATCCAGGAGAGGTCAACAAGGGCTGTGGATTGGAGAATTCTTCACAAGATTGCATTGGACATTGCTCGGGCGCTTGCCTACCTCCATGATACTTGTGTTCCACGAGTCCTCCATCGCGATGTGAAGCCCAGCAACATACTGTTGGATGATGATTTCAATGCATACTTGTCCGACTTCGGATTGGCCAGACTTTTGGGAACTTCTGAAACCCATGCCACTACAGGGGTGGCAGGAACATTCGGTTATGTTGCGCCCGAGTATGCCATGACTTGTCGGGTTTCCGACAAGGCTGACGTGTACAGTTATGGTGTTGTACTTCTAGAGTTGCTCTCAGACAAGAAGGCATTAGACCCTTCATTTTCTTCCTATGGGAATGGCTTCAACATAGTAGCATGGGCATGCCTGCTACTTCGGCAAGGAAGAGCAAATGAGTTTTTCACAGCTGGGCTATGGGATGCAGGACCAGGAGATGATTTGGTGGAGGTGTTGCACCTGGCCATTATGTGCACTGTCGATTCGCTCTCGACGAGACCTTCGATGAAACAGGTTGTGCGAAGGCTAAAGCAACTTCAACCTCCATCATGCTAG 3426 0.4393 MFPSSCTSLIKWRFFHKPMSPLLLLEFYFLLWVLFPSCSDAFLADSDKSALLHFKSSVSDPSGLLSSWNSAGDSNHCSWFGVLCDSNSRVVALNISGNGGESNRSSSPCSDSAKFPLYGFGIRRSCDGSRGALFGKFSPLISKLTELRILSLPFNGFEGEIPPEIWGMGKLDVLDLEGNSITGSLPSHFDGLRNLRVLNLGFNNIVGEIPDSLARLESLEILNLAANGLNGSVPGFIGKLKGVYLLFNLLSGPIPLEIGDNCGKLEHLDLSGNFLVQRIPSSLGNCSQLRSLLLYSNLLEEVIPSELGKLQLLEVLDVSRNALSGPVPPEIGNCSELSVLVLSNLFNPLPEANNTVRESSQLVSINDELNYFEGAMPVEITSLAKLRILWAPRATLEGLFPSSWGACDNLEMVNLAQNYFNGEFPNQLSGCKKLHFLDLSSNNLTGELAEELHVPCMTVFDVSGNILSGSIPEFFNGTCSSVPSWNGTLFELDNVSIPYMSFFSTKVHDGPLLTSAGEVGLSVIHNFGNNNFTGMQSLPIAHDRLGRKMGYALLVGENKLTGPFPANLFDKCDGLDALLLNVSYNRLSGQIPAKFGGMCGSLKFLDASGNRIAGPVPVGLGELVSLVSLNLGWNQLQGSIPTSLGQMKNLVFLSMASNNLTGSIPTSLGQLYSLKVLDLSSNSLTGEIPMGFENLRNLTGLLLNNNKLSGHIPSGLANVTTLSAFNVSFNNLSGSLPSDNNLLKCSSAVGNPFLRPCHMLSLTTTSTDPQGKVPDYNYNSAPPPETASKGSGSGFNSIEIASISSASAIVSVLIALIILFFYTRKWNSRSRVVGSTRKEVIVFTDIGVPLTFETVVRATGNFNASNCIGNGGFGATYKAEIAPGNLVAIKRLSVGRFQGVQQFDAEIKTLGRLRHPNLVTLFGYHASETEMFLIYNYLPGGNLEKFIQERSTRAVDWRILHKIALDIARALAYLHDTCVPRVLHRDVKPSNILLDDDFNAYLSDFGLARLLGTSETHATTGVAGTFGYVAPEYAMTCRVSDKADVYSYGVVLLELLSDKKALDPSFSSYGNGFNIVAWACLLLRQGRANEFFTAGLWDAGPGDDLVEVLHLAIMCTVDSLSTRPSMKQVVRRLKQLQPPSC 1141
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Accr5g01339 1141 Gene3D Phosphorylase Kinase; domain 1 823 937 - -
Accr5g01339 1141 Gene3D Ribonuclease Inhibitor 43 244 IPR032675 -
Accr5g01339 1141 CDD STKc_IRAK 868 1136 - -
Accr5g01339 1141 FunFam LRR receptor-like serine/threonine-protein kinase RPK2 938 1140 - -
Accr5g01339 1141 SUPERFAMILY L domain-like 45 345 - -
Accr5g01339 1141 ProSitePatterns Serine/Threonine protein kinases active-site signature. 982 994 IPR008271 GO:0004672|GO:0006468
Accr5g01339 1141 SUPERFAMILY Protein kinase-like (PK-like) 844 1133 IPR011009 -
Accr5g01339 1141 SMART serkin_6 862 1140 IPR000719 GO:0004672|GO:0005524|GO:0006468
Accr5g01339 1141 ProSitePatterns Protein kinases ATP-binding region signature. 868 890 IPR017441 GO:0005524
Accr5g01339 1141 Gene3D Ribonuclease Inhibitor 531 768 IPR032675 -
Accr5g01339 1141 FunFam LRR receptor-like serine/threonine-protein kinase RPK2 826 937 - -
Accr5g01339 1141 SMART LRR_typ_2 168 191 IPR003591 -
Accr5g01339 1141 SMART LRR_typ_2 695 718 IPR003591 -
Accr5g01339 1141 SMART LRR_typ_2 623 647 IPR003591 -
Accr5g01339 1141 SMART LRR_typ_2 671 694 IPR003591 -
Accr5g01339 1141 SMART LRR_typ_2 310 334 IPR003591 -
Accr5g01339 1141 SMART LRR_typ_2 192 216 IPR003591 -
Accr5g01339 1141 SMART LRR_typ_2 262 286 IPR003591 -
Accr5g01339 1141 Pfam Protein kinase domain 865 1063 IPR000719 GO:0004672|GO:0005524|GO:0006468
Accr5g01339 1141 SUPERFAMILY L domain-like 303 481 - -
Accr5g01339 1141 ProSiteProfiles Protein kinase domain profile. 862 1136 IPR000719 GO:0004672|GO:0005524|GO:0006468
Accr5g01339 1141 FunFam LRR receptor-like serine/threonine-protein kinase RPK2 520 762 - -
Accr5g01339 1141 FunFam LRR receptor-like serine/threonine-protein kinase GSO1 248 491 - -
Accr5g01339 1141 Pfam Leucine rich repeat N-terminal domain 44 85 IPR013210 -
Accr5g01339 1141 PRINTS Leucine-rich repeat signature 434 447 - -
Accr5g01339 1141 PRINTS Leucine-rich repeat signature 671 684 - -
Accr5g01339 1141 MobiDBLite consensus disorder prediction 765 792 - -
Accr5g01339 1141 Pfam Leucine rich repeat 170 229 IPR001611 GO:0005515
Accr5g01339 1141 Pfam Leucine Rich Repeat 264 286 IPR001611 GO:0005515
Accr5g01339 1141 Pfam Leucine Rich Repeat 673 695 IPR001611 GO:0005515
Accr5g01339 1141 Gene3D Transferase(Phosphotransferase) domain 1 938 1139 - -
Accr5g01339 1141 Gene3D Ribonuclease Inhibitor 349 530 IPR032675 -
Accr5g01339 1141 Gene3D Ribonuclease Inhibitor 245 348 IPR032675 -
Accr5g01339 1141 SUPERFAMILY L domain-like 553 760 - -
Accr5g01339 1141 PANTHER LRR RECEPTOR-LIKE SERINE/THREONINE-PROTEIN KINASE-RELATED 361 1135 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Accr5g01339 Accr-Chr5 39307914 39311339 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Accr5g01339 28 1141 Receptor kinase-like Gene Family AT3G02130 66.931 0.0 1416
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-XV Accr5g01339 Pkinase 8.2e-43 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Accr5g01339 - - qsa:O6P43_009155 1668.29