Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Accr5g01334 ATGATTAAGATTCCAAAAGAGGCCTCAGATCTTTCAAGAAAACAAGAAGAAGGTGGAGGTAATGATCATGATTCACCAAGTAAATATTTTGAGAAAGAAAGGGCATTATTGGCATCATCATCAACAACAACGTCGAGAAGCATGATAGAACCAAAATGGGTGAGGTTACAGGATCCAAGGATAGTCAGGGTAGCAAGAGCCTGTGGAGGCAAAGACAGACACAGCAAGGTTTGTACCATACGAGGTTTAAGAGACCGAAGAGTTAGGTTGTCAGTGACCACAGCGATTCAATTGTATGACCTTCAAGAGAGGCTAGGGTTTAACCAACCCAGTAAGGTCATTGATTGGCTTCTTCATGCTGCCAAGAGTGACATTGATCAACTTCCTCCTCTTCCACAATTAAATCTTCCCCTAGCTCATCATCATCATGCTATTCTCACCTCTAATTCTCCGCCCAACCAAGAAGAAGATGATCATGATGTTAAACAACAAGTAACAAATAATGATGATGATCATAATGAGTTGTCTCATCCACGTCATCATCATCATAATCCCTCCATTGTTGGGTACCATGGTGAAGGTGTTCATGTTTCTCATGAGACAGATTTGCAGAGCCTTAACGTTGTACCTTTCTCATCAACTTTGTCTTTGTCCACTGGGGATTCTTCTCATCATCATCATAATTTTGCTTCACAACATTTTGGAGGGAACATGGACATGGATGATCATAATCATATTCTTCCAAGACAAGTCAACTATAATAATAACCACTATCCCGCCATGTTGATGAGTTCTAGTTCAAATCTGTATCATCCTATCTCTATGGCACAATCCTTGAAACCATTTGGGTTGAGTATGATGACTCCTAATAACACTGCTACTACTGCTACAGATCAGAGCCAGTCACATAACCACCTTCAGAATTTTCCCTCCAACAAGTGA 942 0.4055 MIKIPKEASDLSRKQEEGGGNDHDSPSKYFEKERALLASSSTTTSRSMIEPKWVRLQDPRIVRVARACGGKDRHSKVCTIRGLRDRRVRLSVTTAIQLYDLQERLGFNQPSKVIDWLLHAAKSDIDQLPPLPQLNLPLAHHHHAILTSNSPPNQEEDDHDVKQQVTNNDDDHNELSHPRHHHHNPSIVGYHGEGVHVSHETDLQSLNVVPFSSTLSLSTGDSSHHHHNFASQHFGGNMDMDDHNHILPRQVNYNNNHYPAMLMSSSSNLYHPISMAQSLKPFGLSMMTPNNTATTATDQSQSHNHLQNFPSNK 313
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Accr5g01334 313 Pfam TCP family transcription factor 70 172 IPR017887 -
Accr5g01334 313 MobiDBLite consensus disorder prediction 153 181 - -
Accr5g01334 313 ProSiteProfiles TCP domain profile. 70 128 IPR017887 -
Accr5g01334 313 PANTHER TRANSCRIPTION FACTOR TCP4-RELATED 20 305 IPR005333 GO:0003700
Accr5g01334 313 MobiDBLite consensus disorder prediction 290 313 - -
Accr5g01334 313 MobiDBLite consensus disorder prediction 1 28 - -
Accr5g01334 313 MobiDBLite consensus disorder prediction 145 192 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Accr5g01334 Accr-Chr5 39249592 39250533 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Accr5g01334 53 155 TCP Transcription Factor Family AT3G02150 66.667 8.64e-44 151
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF TCP Accr5g01334 TCP 2.2e-28 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Accr5g01334 - - pcin:129304766 315.849