Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Accr5g01314 ATGGATAGCATTCTGGAGCGATATGAGAGATGTTCGCAATCAGAACAACTTGCTGGAACTAACAACGATTCCCAGGGAAACTTGTCTTTGGAGTTATTCAAGCTCACTACCAGAGCGGAAGTTTTACAGAAGAACATAAGGAATTATGAAGGAGAGGATCTGGATCCCTTGAGTTTGAAGGAGCTTCAGAGTCTGGAGCACCAGCTTGACACTGCTATAAAGCGCATCCGAACAAAAAAGAACCAAATCATGATGGAAACCGTCTCAGGGGAGCAAAAAAAGGAAAAGGCATTGAAAGATGAGAACAACATGCTAGCAAAGAAGTTGAAGGAGAAGGAGAAGGAGAAGTCACTGATAAATGGAGTGGGTCCCCGAAGGAGGCAGGAAACCCTAGCCCAGTATCCCTTCAACTTCAACGTTTCTCCATCGCAGCGGCTGCCACCACCTACTCTAACCCTCGGGGGGACTTGTGGAGAAGGAGGAGGCCTGTCGGCGGAGGATTATGAAGAAGCTGAAGCTGGTCCCAGTAACACCATCATGCCACCCTGGATGATGTTTCATACGACTACTTAG 573 0.4747 MDSILERYERCSQSEQLAGTNNDSQGNLSLELFKLTTRAEVLQKNIRNYEGEDLDPLSLKELQSLEHQLDTAIKRIRTKKNQIMMETVSGEQKKEKALKDENNMLAKKLKEKEKEKSLINGVGPRRRQETLAQYPFNFNVSPSQRLPPPTLTLGGTCGEGGGLSAEDYEEAEAGPSNTIMPPWMMFHTTT 190
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Accr5g01314 190 Coils Coil 95 115 - -
Accr5g01314 190 ProSiteProfiles K-box domain profile. 25 115 IPR002487 GO:0003700|GO:0005634|GO:0006355
Accr5g01314 190 Pfam K-box region 22 109 IPR002487 GO:0003700|GO:0005634|GO:0006355
Accr5g01314 190 Coils Coil 32 52 - -
Accr5g01314 190 Coils Coil 62 82 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Accr5g01314 Accr-Chr5 39014838 39018508 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Accr5g01314 1 190 MADS-box Gene Family AT5G60910 45.685 1.18e-40 134
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Accr5g01314 K09264 - vvi:100232953 148.288