Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Accr5g01307 ATGGTTCGCCAAGCTACTTTAGTTATCATTGGTGTCACAGTTGGCGTGGTATTGGGAGTTTTTATTGCTGCCCTTATATTTTTTGGCATAAGGTGGTATAAAAAGCATGCTCGTCTTACACTTTCTGCGAAAGAGAGTAGTTTAACCACTCTTCCAATACGCACAAATGGATTAGGAGCAAGCACTGACTTTAGTGCCTCACTTACAAGTTCCATATCCAATTCAATGCCAGAAAATTTGCCAAGAAACTCCAATTTCTATTGGCGGAGTCATCAGAACAAAGATCGATTTTCTCCAACATCTGGCATTTCAAAGTACTCATACAAAGAAATTCAAAAAGCCACGCAGAATTTCACAACTATTTTGGGACAAGGATCATTTGGCACAGTTTATAAAGCCACAATGCCTACAGGAGAGGTGGTAGCTGTGAAGGTGCTTGATTCTAATTCTAAACAAGGGGAGAAAGAGTTCCAAACAGAGGTGCTTTTGCTGGGAAGATTGCATCATCGGAATCTTGTGAATTTAGTAGGATTTTGTGTAGATAAAGGGCACCGTATTCTGGTTTATGAGTTCATGAGCAATGGAAGTTTGTCAAACCTTCTATACGGTGAAGTAAAGGCCTTGAGTTGGAATGAAAGGCTTCAAATTGTTATTGATATTTCACATGGAATTGAATATCTTCATGAAGGAGCAGTCCCACCCGTTATACATCGTGATTTGAAGTCTGCCAATATATTGTTAGATTATTCAATGAGAGCTAAGGTTGCTGATTTTGGGTTGTCAAAGGAAGAGGTCTTTGATGGCCAGAATTCAGGCCTTAAAGGAACATACGGCTACATGGATCCATCATACATTTCCACAAACACGTTCACAATGAAGAGTGACATCTACAGTTTTGGTATAATCATTTTTGAGCTCATTACAGCAATTCACCCACATCAAAATTTGATGGAATATATAAACCTTGCTGCAATGGATCATGATGGCGTTGATGAGATCCTTGACAAACAACTTGTAGGAAAATGCAACCTTGAAGAAGTAAGGCAGCTTGCTAAAATTGCATACAAATGTTTGCACAGATCTCCTAGGAAACGCCCTTCCATTGCTGAGGTTTCACAGGGCATATTGAGAATAAAGCAAAGGCGCCTTATAAAAGAAGATACCTTGCCATTTGCGGGCAGTAACTTATCCAGGGCTTTGACTCGAGTAGAGGATCAACAAGTTGAATTGAATAAGTTAACCAGCATGAAGCACAGAGAAACTGGATGA 1269 0.3964 MVRQATLVIIGVTVGVVLGVFIAALIFFGIRWYKKHARLTLSAKESSLTTLPIRTNGLGASTDFSASLTSSISNSMPENLPRNSNFYWRSHQNKDRFSPTSGISKYSYKEIQKATQNFTTILGQGSFGTVYKATMPTGEVVAVKVLDSNSKQGEKEFQTEVLLLGRLHHRNLVNLVGFCVDKGHRILVYEFMSNGSLSNLLYGEVKALSWNERLQIVIDISHGIEYLHEGAVPPVIHRDLKSANILLDYSMRAKVADFGLSKEEVFDGQNSGLKGTYGYMDPSYISTNTFTMKSDIYSFGIIIFELITAIHPHQNLMEYINLAAMDHDGVDEILDKQLVGKCNLEEVRQLAKIAYKCLHRSPRKRPSIAEVSQGILRIKQRRLIKEDTLPFAGSNLSRALTRVEDQQVELNKLTSMKHRETG 422
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Accr5g01307 422 PANTHER PROMASTIGOTE SURFACE ANTIGEN PROTEIN PSA 5 382 - -
Accr5g01307 422 FunFam Calcium/calmodulin-regulated receptor-like kinase 2 192 399 - -
Accr5g01307 422 FunFam S-receptor-like serine/threonine-protein kinase 87 191 - -
Accr5g01307 422 SUPERFAMILY Protein kinase-like (PK-like) 86 372 IPR011009 -
Accr5g01307 422 ProSitePatterns Protein kinases ATP-binding region signature. 122 144 IPR017441 GO:0005524
Accr5g01307 422 ProSiteProfiles Protein kinase domain profile. 116 376 IPR000719 GO:0004672|GO:0005524|GO:0006468
Accr5g01307 422 Gene3D Phosphorylase Kinase; domain 1 82 191 - -
Accr5g01307 422 SMART serkin_6 116 384 IPR000719 GO:0004672|GO:0005524|GO:0006468
Accr5g01307 422 CDD STKc_IRAK 122 378 - -
Accr5g01307 422 Gene3D Transferase(Phosphotransferase) domain 1 192 390 - -
Accr5g01307 422 Pfam Protein kinase domain 120 373 IPR000719 GO:0004672|GO:0005524|GO:0006468
Accr5g01307 422 ProSitePatterns Serine/Threonine protein kinases active-site signature. 235 247 IPR008271 GO:0004672|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Accr5g01307 Accr-Chr5 38982198 38985552 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Accr5g01307 63 371 Receptor kinase-like Gene Family AT3G19300 39.623 2.53e-71 235
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-I-2 Accr5g01307 Pkinase 9.4e-51 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Accr5g01307 - - gmx:100819995 660.988