Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Accr5g01285 ATGGAGGAGGATGCGATTCCAGCACAAGCGTATAAATTCACCAGAGTCGGAAATGGCAGAAACGACTCCAACAAGATAGGTTCTAGAGGGAGCGGTGGCGGCGGAGCTGGCGGCGGCGACGTCAGCTCGAATCGGTTCGAGGGCTGGCACCACCATTCTTCGAGAATCATTAGGGTTTCTCGAGCATCTGGAGGGAAAGACCGGCACAGCAAGGTGATGACTTCAAAGGGTTTAAGAGACCGAAGGGTTAGGCTGTCGGTAACCACAGCAATCCAGTTCTATGATCTTCAAGATCGGCTTGGCTATGACCAACCTAGTAAAGCTGTGGAGTGGCTAATCAAAGCAGCTTCTGACGCCATTTCTGAGCTTCCCTTTCTCAACAACACATTCCCTGATAAGCAGCCCAGCGATGAGAAAAGAGGAACAGAACAAGGGTTTGATGATACAGATGATCATGCTGAGGTAAATGCCGATGATGGTGATTATCACCAGACTCAAAGTCAGAACCTTTCTTTGTCTAAGTCTGCTTGCAGCAGCACTTCTGAAACAAGCAAAGGCTCTGGTTTGTCCCTCTCAAGGTCTGATATTCGAGTGAACCGTGAGAAGGCCAGAGAGAGGGCAAGAGAGAGAGCAGCAAAAGAGAAGGAAAAAGAAAACACTGCCCATCCGCACAATAATGTGAATAACCCCATTTCTCAAACTGCTTCTTTCACTGAGCTTCTTACCGGCGGGGTTACTAGTACTGTTAATCCTTCCACCACCACGAGTCCGGCCGGCGATGATCATGAGCCTGATTTGTTCAACAAGGCAGCGAGACAACAATGGTGTACAACAACACCCATGGACTACTTTAACTCAGGCCTCGTGGGGCATCACTCTATTAGAAGTCATAATAATAATAATCAATCTTCAGGGTTATTCGCAGGACAAAGCCAACTGGGAAACTCTAATTCCCTTCCTCTTCAGGCTTCTCCATTCAATGTGGGGAGTGAAAATCACTCAGATCAGCTCCAGCATTTCTCATTATCCACCATGCCTGACCATCATCTCATACCCAGCGGAAGCTGCAGCGACTACAACCTCAACTTCACCATCTCCTCTTCTTCTTCTTCTTCAGGCTTTGCTGGTTTCAACAGGGGGACCCTTCAGTCCAATTCACCGTCTGTTTTGCCTCACCCTCTTCAGAGGTTTTCTTCTTCTTTAGATGGATCCAATCTACCTTTCTTCATAGGAGCTGCTGCTGTGCCAACCATGGAGAATCACCACCACCACCAGTTCTCATCACCTGGATTTGATGGCCGTTTGCAACTATGTTATGGAGACTTAACCCGCCATTCTGACCACAACAAGGGCAAAGGCAAGAACTGA 1368 0.481 MEEDAIPAQAYKFTRVGNGRNDSNKIGSRGSGGGGAGGGDVSSNRFEGWHHHSSRIIRVSRASGGKDRHSKVMTSKGLRDRRVRLSVTTAIQFYDLQDRLGYDQPSKAVEWLIKAASDAISELPFLNNTFPDKQPSDEKRGTEQGFDDTDDHAEVNADDGDYHQTQSQNLSLSKSACSSTSETSKGSGLSLSRSDIRVNREKARERARERAAKEKEKENTAHPHNNVNNPISQTASFTELLTGGVTSTVNPSTTTSPAGDDHEPDLFNKAARQQWCTTTPMDYFNSGLVGHHSIRSHNNNNQSSGLFAGQSQLGNSNSLPLQASPFNVGSENHSDQLQHFSLSTMPDHHLIPSGSCSDYNLNFTISSSSSSSGFAGFNRGTLQSNSPSVLPHPLQRFSSSLDGSNLPFFIGAAAVPTMENHHHHQFSSPGFDGRLQLCYGDLTRHSDHNKGKGKN 455
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Accr5g01285 455 PANTHER TRANSCRIPTION FACTOR TCP4-RELATED 36 383 IPR005333 GO:0003700
Accr5g01285 455 ProSiteProfiles R domain profile. 197 215 IPR017888 -
Accr5g01285 455 MobiDBLite consensus disorder prediction 1 47 - -
Accr5g01285 455 Coils Coil 197 219 - -
Accr5g01285 455 MobiDBLite consensus disorder prediction 195 222 - -
Accr5g01285 455 MobiDBLite consensus disorder prediction 125 231 - -
Accr5g01285 455 MobiDBLite consensus disorder prediction 133 159 - -
Accr5g01285 455 Pfam TCP family transcription factor 64 217 IPR017887 -
Accr5g01285 455 ProSiteProfiles TCP domain profile. 65 123 IPR017887 -
Accr5g01285 455 MobiDBLite consensus disorder prediction 160 194 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Accr5g01285 Accr-Chr5 38686929 38688296 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Accr5g01285 44 455 TCP Transcription Factor Family AT4G18390 44.545 7.52e-81 253
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF TCP Accr5g01285 TCP 1.7e-40 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Accr5g01285 - - tcc:18596471 432.95