Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Accr5g01278 ATGAGGCGGAATTGCAACTTGGAGCTTCGTCTTTTTCCTTCCTTTGAAACCAGGTCGACGGAACAAGATGGTGAGAGCCCACAGCAAAATCTGCAGAAGCTCACCATGTTCTATGACGGCAAGATGTGTGTTTTCGATGTCAACGAGGTTCAGGCTAGATGGATCTTGACGCTTGCAAATAGAGAAATGAAGGAAAGAGCAAGGACACCAAACGGATACGGGTCCGGGTCCGGGTCAGGGTCGGAGCCATCTTCACCAAATACTACAGTGCCAATGTATAGCCCAAATAGTGGTCTTTCTATGAAAAGATCGCTCCAAAGTTTCCTTCAGAAGAGAAAGAATCGAATCCTTGAAGCTTCCCCCTACCATCACTAA 375 0.4693 MRRNCNLELRLFPSFETRSTEQDGESPQQNLQKLTMFYDGKMCVFDVNEVQARWILTLANREMKERARTPNGYGSGSGSGSEPSSPNTTVPMYSPNSGLSMKRSLQSFLQKRKNRILEASPYHH 124
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Accr5g01278 124 SMART tify_2 27 61 IPR010399 -
Accr5g01278 124 ProSiteProfiles Tify domain profile. 27 61 IPR010399 -
Accr5g01278 124 PANTHER PROTEIN TIFY 4A-RELATED-RELATED 23 122 IPR040390 -
Accr5g01278 124 Pfam Jas motif 102 122 IPR018467 -
Accr5g01278 124 Pfam tify domain 29 60 IPR010399 -
Accr5g01278 124 MobiDBLite consensus disorder prediction 72 104 - -
Accr5g01278 124 MobiDBLite consensus disorder prediction 65 104 - -
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Accr5g01278 1 123 Tify Gene Family AT1G30135 43.066 4.94e-28 98.2
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF Tify Accr5g01278 tify 2e-09 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Accr5g01278 - - tcc:18596482 133.65