Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Accr5g01250 ATGTCACTTTCCTGTGCAAAAAAATTCTTCCAGAGGTTCTGGGTGGATGAATTCCAAATGGGAAGTTTTGCACATAGCAGCTTTCTGTCTAGTGATCTTCTGCCATCCCTTGGAGCCCGAATCAACCAAGAAACTAGACTTCGAAGATACATAATCTCCCCCTTCAACTCCTGGTATAGGGCTTGGGAGATGTTACTGATTGTCCTGGTCATCTACTCAGCCTGGATTTGTCCCTTTGAGTTTGCATTTCTTCCTTACAAGCAAGATGCACTATTTATCATCGACAACACTGTCAATGGCTTCTTTGCCATTGACATAGTCCTGACATTCTTTGTTGCATATCTAGATAGTCACTCTTACCTTCTTGTTGACGATCACAAGAAAATTGCAGCAAGGTACCTGTCGTCCTGGTTCATTTTCGATGTCTGCTCAACGGCACCATTTCAGTCCATCAGTCTACTCTTCACTAAACATAGTAACCTTGGCTTTAAACTGCTTAACATGCTTCGGTTATGGCGTCTGAGACGTGTCAGCTTTCTGTTTGCAAGGCTTGAGAAAGACATCCGCTTCAATTATTTCTGGACTAGATGCACGAAGCTCATTTCTGTAACCTTGTTTGCAGTGCACTGTGCCGGATGCTTTAATTATCTGCTTGCAGATAGATACCCTGATTCTAAAAGGACCTGGATTGGTGCTGTGTACCCAAATTATAAAGAACTGAGTCTCTGGGACAGATATGTGACTTCAATATATTGGTCCATTGTCACACTTACAACTACAGGCTACGGGGACTTGCATGCTGAAAACACAGGAGAGATGCTGTTCGATATCTTTTACATGTTGTTCAACTTGGGATTAACGTCATATATCATTGGGAACATGACAAACCTTGTAGTCCACTGGACCAGCCGCACCAGAAATTTTAGAGACTCAGTAAGAGCGGCTACAGAATTTGCTTCAAGAAACCATTTGCCCCATCATATACAAGATCAAATGTTGTCGCACATGTGTTTGAGATTTAAAACGGAAGGAATGAAGCAACAAGAAGCACTAAATGGTCTGCCTAAGGCGATTCGTTCAAGCATTTCACACCATCTATTTTCCCCCATACTGCAGAAAGTCTACCTCTTCCAAGGAGTCTCTCATGACCTTCTTTTCCAACTGGTTTCAGAAATAGAAGCAGAATTTTTCCCACCCAAGGAAGAAGTGATCCTGCAAAACGAGTCTCCAACAGATCTTTATATACTGGTTTCAGGGGCAGTGGATATTATTCGCTACATTGATGGACGAGATCAAGTTATCGGTAAGGCAATTGGAGGGGATACAGTTGGTGAGATTGGGGTTTTATACTACAGACCACAGCCCTTCACTGTTCGGACCGTGGAGCTATCTCAAATATTAAGACTTAGCAGAACTTCCTTAATGAATGCCATACAAGCAACTCCAGAAGATACACAAATTATAATGAACAATCTTTTCATGAAACTTAGGGGACAAGGCCTGGGCTCTGAATATGTCCATGAAATGCTTGGTGGAACAAGAATAGGAGGCTGTACGAAAAATTCAAATGGAAGTTCCAGAATGGAAGAAGGAGAATTCAAAGATTTTACAGACTTGGAAGACACTACTCGTGATGGTGCAAAGGACAGTCAACAGGATATGATTGAAATTTTGCTCCAAAGGGACACAAATGCAAAGAGTCTAAATTCCCAACCACGAACTCCAAAAGTTCCAATAGAACAGCAAGAAAACAAGAGCATTTCTGACCTCTTAATGAGTGGTGAAAATAGGAGAAGGTCAGATGAATATAGAATAGATTTGGTGGCTAGGAATGATCTAACCAGAAGCAGAAAACAGGATGGTCCCAGGCCAAACACTTGTTCTGGAAATCCCAATGTCCCAGTTGATAGAGAGATGGCAAAACGCATCAAAAAAAGAGTTACCATCCACTTGATCTGTGAATACTGTAGTGCTTCACAGGGGCATGGGAAATTGATACTTTTACCTGATTCATTAGAAGAGCTGCTCAAGGTTGCTGGTCACAAATTTGAAGGCTCCAAACCTACAAACGTTGTTACTGCAGAAAATGCGGAGATAGATGACATAGGCATCATTGAAGACGGTGATCATCTCTTCCTTCTTTGCAGTGTTAGAGAACATTTGAATTCATGA 2172 0.4171 MSLSCAKKFFQRFWVDEFQMGSFAHSSFLSSDLLPSLGARINQETRLRRYIISPFNSWYRAWEMLLIVLVIYSAWICPFEFAFLPYKQDALFIIDNTVNGFFAIDIVLTFFVAYLDSHSYLLVDDHKKIAARYLSSWFIFDVCSTAPFQSISLLFTKHSNLGFKLLNMLRLWRLRRVSFLFARLEKDIRFNYFWTRCTKLISVTLFAVHCAGCFNYLLADRYPDSKRTWIGAVYPNYKELSLWDRYVTSIYWSIVTLTTTGYGDLHAENTGEMLFDIFYMLFNLGLTSYIIGNMTNLVVHWTSRTRNFRDSVRAATEFASRNHLPHHIQDQMLSHMCLRFKTEGMKQQEALNGLPKAIRSSISHHLFSPILQKVYLFQGVSHDLLFQLVSEIEAEFFPPKEEVILQNESPTDLYILVSGAVDIIRYIDGRDQVIGKAIGGDTVGEIGVLYYRPQPFTVRTVELSQILRLSRTSLMNAIQATPEDTQIIMNNLFMKLRGQGLGSEYVHEMLGGTRIGGCTKNSNGSSRMEEGEFKDFTDLEDTTRDGAKDSQQDMIEILLQRDTNAKSLNSQPRTPKVPIEQQENKSISDLLMSGENRRRSDEYRIDLVARNDLTRSRKQDGPRPNTCSGNPNVPVDREMAKRIKKRVTIHLICEYCSASQGHGKLILLPDSLEELLKVAGHKFEGSKPTNVVTAENAEIDDIGIIEDGDHLFLLCSVREHLNS 723
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Accr5g01250 723 SUPERFAMILY Voltage-gated potassium channels 54 298 - -
Accr5g01250 723 SUPERFAMILY cAMP-binding domain-like 303 496 IPR018490 -
Accr5g01250 723 Pfam Ion transport protein 60 305 IPR005821 GO:0005216|GO:0006811|GO:0016020|GO:0055085
Accr5g01250 723 FunFam Potassium channel KAT3 61 300 - -
Accr5g01250 723 MobiDBLite consensus disorder prediction 562 595 - -
Accr5g01250 723 SMART cnmp_10 376 493 IPR000595 -
Accr5g01250 723 MobiDBLite consensus disorder prediction 612 634 - -
Accr5g01250 723 Pfam KHA, dimerisation domain of potassium ion channel 645 713 IPR021789 -
Accr5g01250 723 Gene3D Helix hairpin bin 300 366 - -
Accr5g01250 723 Gene3D Jelly Rolls 367 500 IPR014710 -
Accr5g01250 723 PRINTS EAG/ELK/ERG potassium channel family signature 246 263 IPR003938 GO:0005249|GO:0006813|GO:0016020
Accr5g01250 723 PRINTS EAG/ELK/ERG potassium channel family signature 290 299 IPR003938 GO:0005249|GO:0006813|GO:0016020
Accr5g01250 723 PRINTS EAG/ELK/ERG potassium channel family signature 72 79 IPR003938 GO:0005249|GO:0006813|GO:0016020
Accr5g01250 723 PRINTS EAG/ELK/ERG potassium channel family signature 95 105 IPR003938 GO:0005249|GO:0006813|GO:0016020
Accr5g01250 723 PRINTS EAG/ELK/ERG potassium channel family signature 272 283 IPR003938 GO:0005249|GO:0006813|GO:0016020
Accr5g01250 723 PRINTS EAG/ELK/ERG potassium channel family signature 106 115 IPR003938 GO:0005249|GO:0006813|GO:0016020
Accr5g01250 723 ProSiteProfiles cAMP/cGMP binding motif profile. 376 495 IPR000595 -
Accr5g01250 723 Gene3D - 60 299 - -
Accr5g01250 723 PANTHER POTASSIUM CHANNEL AKT1 25 497 IPR045319 GO:0005249|GO:0006813
Accr5g01250 723 Pfam Cyclic nucleotide-binding domain 396 479 IPR000595 -
Accr5g01250 723 ProSiteProfiles KHA domain profile. 646 723 IPR021789 -
Accr5g01250 723 MobiDBLite consensus disorder prediction 562 591 - -
Accr5g01250 723 CDD CAP_ED 376 489 IPR000595 -
Accr5g01250 723 FunFam Potassium channel KAT2 364 500 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Accr5g01250 Accr-Chr5 38293722 38297516 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Accr5g01250 1 713 Ion Channels AT5G46240 61.818 0.0 882
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Accr5g01250 K21867 - gmx:100811356 974.541