Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Accr5g01225 ATGTCTGATGAACCAAGTAAGGAGCTTTATTACCAGGATCTTTACTTAGGCCATAGTAATCAGCAGTCCACAGGTGGATCTGCCATGTTCTGTGAGAAAAGTTTCTCTCCCTTTAATATTCCAGGCCCTTCGGCGTCGTCATCAGGCTTTGATGATCCTCCGTACATGAGTTTCACTGAATGCCTGCAAGGAGGCCTCGACTACAATTCTCTTGCTACTTCCTTTGGCCTGTCTCCTTCCTCTTCGGAGGTTTTTTCTTCTGTTGAAGGCAACAATAATAATTATCAGAAGCCTTCATCAGAAGGTCATGGAGATTTAGGTGGTGGTGGGAGTGAAACGCCGGTGACCCAGAATTCATCGATCTCTAATTCATCTTCTTCTGAAGCCGGAGCTGAAGAAGAACAAGACTCGGGGAAGAGCAAGAAAGATAGTGATGAGGTCAAAGCTTCAGAAGAAGGATCTAACAACAAGAAAGGGAACAAAGGCAGGAAGAAAGGAAAGAAGCAGCAGAAGGAGCCTAGATTTGCTTTCATGACCAAGAGCGAGGTTGACCACCTAGAAGATGGTTATAGATGGAGAAAATATGGACAGAAAGCCGTCAAGAATAGCCCTTACCCAAGAAGCTACTACAGGTGCACGACGCAGAAGTGCACAGTGAAGAAACGCGTGGAGAGGTCATATCAGGACCCAACCACTGTGATAACAACCTATGAGGGTCAGCACAACCATCCTGTCCCCACGTCGCTTAGAGGGAATGCGGCCGCCATGTTCACACCTTCTTCTCTCTTAACACCACAGCACACTCTTCCCTCCGCCAACGCCGCCTCCCACCACCACGATTTCTTCCTTCACATGCCTCACCACTTCAACACCGTCGCCGCCTCTTATAACAATCTCATTAACACTGGTACCAACAATGCTTCTAATTCTCTTCATCATCAGCTTCAGCAGCAGTATCATAATAACCCTCATGACTACGGCCTCCTCCAGGACATTCTCCCTTCCATGTTCCTCAAACAAGATCATTCCTAG 1032 0.4719 MSDEPSKELYYQDLYLGHSNQQSTGGSAMFCEKSFSPFNIPGPSASSSGFDDPPYMSFTECLQGGLDYNSLATSFGLSPSSSEVFSSVEGNNNNYQKPSSEGHGDLGGGGSETPVTQNSSISNSSSSEAGAEEEQDSGKSKKDSDEVKASEEGSNNKKGNKGRKKGKKQQKEPRFAFMTKSEVDHLEDGYRWRKYGQKAVKNSPYPRSYYRCTTQKCTVKKRVERSYQDPTTVITTYEGQHNHPVPTSLRGNAAAMFTPSSLLTPQHTLPSANAASHHHDFFLHMPHHFNTVAASYNNLINTGTNNASNSLHHQLQQQYHNNPHDYGLLQDILPSMFLKQDHS 343
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Accr5g01225 343 Pfam WRKY DNA -binding domain 187 244 IPR003657 GO:0003700|GO:0006355|GO:0043565
Accr5g01225 343 PANTHER WRKY TRANSCRIPTION FACTOR PROTEIN 1-RELATED 93 303 IPR044810 GO:0003700
Accr5g01225 343 MobiDBLite consensus disorder prediction 111 131 - -
Accr5g01225 343 ProSiteProfiles WRKY domain profile. 181 246 IPR003657 GO:0003700|GO:0006355|GO:0043565
Accr5g01225 343 FunFam WRKY transcription factor 57 172 246 - -
Accr5g01225 343 SUPERFAMILY WRKY DNA-binding domain 178 246 IPR036576 GO:0003700|GO:0006355|GO:0043565
Accr5g01225 343 MobiDBLite consensus disorder prediction 132 159 - -
Accr5g01225 343 Gene3D WRKY domain 171 247 IPR036576 GO:0003700|GO:0006355|GO:0043565
Accr5g01225 343 SMART WRKY_cls 186 245 IPR003657 GO:0003700|GO:0006355|GO:0043565
Accr5g01225 343 MobiDBLite consensus disorder prediction 77 180 - -
Accr5g01225 343 MobiDBLite consensus disorder prediction 77 100 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Accr5g01225 Accr-Chr5 38091302 38092817 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Accr5g01225 39 341 WRKY Transcription Factor Family AT4G18170 51.125 1.48e-72 226
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF WRKY Accr5g01225 WRKY 2.7e-25 CL0274
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Accr5g01225 - - gmx:100816891 334.339