Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Accr5g01224 ATGGAGGATCCTCTGCTTCCATATGTCAGTCCCAGGAAGAAGCCTCCGCCGTTATGCCCTTTACCGGAGCACGATGAGGTCGTTGTTCATCTTACCCCGTCGGCGATTAAGGACCGTCTTATCTTTGGTCCTTCTACCCCAACAGGTTCTTCCCCTTTGCTTGAGGCTTTAACACTTACATTTAACTCACCAAAACCCTCCTCTTCTTCAGAGGACCCTCAAGATACACAACCTCAACAACAGTCTTGGCTTACTGACCCCAATTACCCAAGTCACAAAACTAATCTTCATCGCTCCAAAACTGCCCCGGCTATGGCGGTAATCAGAGGTGTTCATCACCAGAGTCCTGTTTCTAGACCTCAATCTGGGTCCCAATCAATTGTTCGTCAAGCTGTTATTCTTCTTATAGGGTATTTGTCGTTGGGGGTGATTATTTATTGGTTCAATCGTCATAATTTTTCAGCAACTGAGACTCATCCTGTTGTGGATGCTTTATATTTTTGTATAGTTACTATGTGTACAATAGGCTATGGTGATATTACTCCAAACAGCTCAGCGACAAAACTGTTTTCCATATTGTTTGTGCTGGTGGGTTTTGGGTTTATTGACATACTGCTCAGTGGGATGGTCAGTTATGTTCTTGATTTGCAAGAGAATCACTTGCTCCAAGCGATGAAGACTAAGGTTGAAATTGAGAAGGATGCGAGATCATATATAATTGATGTGAAGAAAGGGAGAATGAGGATTAGGTTGAAGGTGTGTTTGGCATTAGGGGTTGTCGTCCTTTGTATTGGAATTGGTTTTGGGTTTATGCATTTTGTGGAAGGACTTGGGTTGTTGGATTCTTTTTATCTTTCGGTTATGTCAGTAACAACTGTTGGGTATGGTGACCATGCATTTAAGACATTGGCCGGTCGCATCTTTGCTGCAATATGGTTGCTTGTATCAACTCTTGCAGTGGCCCGGGCATTCCTGTATTTAGCTGAGGCAAGAGTGGATAAGCGGCATAGGAAGATGGCAAAGTGGATTCTTGGTCAGGATATGACCGTCTCTGAGTTTCTTGCTGCGGATATAGACAATAATGGCTTTGTGAGTAAATCAGAATATGTTATTTACAAGCTCAAGGAGATGGGGAAAGTTTCAGATAAAGACATTTCGCAGATTAGTGAAAAATTTGATAGAATAGATGCCGGCAACTGTGGAAAAATAACTCTAGCTGATCTTATGGAGGCTTAA 1236 0.4256 MEDPLLPYVSPRKKPPPLCPLPEHDEVVVHLTPSAIKDRLIFGPSTPTGSSPLLEALTLTFNSPKPSSSSEDPQDTQPQQQSWLTDPNYPSHKTNLHRSKTAPAMAVIRGVHHQSPVSRPQSGSQSIVRQAVILLIGYLSLGVIIYWFNRHNFSATETHPVVDALYFCIVTMCTIGYGDITPNSSATKLFSILFVLVGFGFIDILLSGMVSYVLDLQENHLLQAMKTKVEIEKDARSYIIDVKKGRMRIRLKVCLALGVVVLCIGIGFGFMHFVEGLGLLDSFYLSVMSVTTVGYGDHAFKTLAGRIFAAIWLLVSTLAVARAFLYLAEARVDKRHRKMAKWILGQDMTVSEFLAADIDNNGFVSKSEYVIYKLKEMGKVSDKDISQISEKFDRIDAGNCGKITLADLMEA 411
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Accr5g01224 411 FunFam Two-pore potassium channel 5 116 226 - -
Accr5g01224 411 Gene3D - 119 239 - -
Accr5g01224 411 MobiDBLite consensus disorder prediction 1 20 - -
Accr5g01224 411 PANTHER POTASSIUM CHANNEL, SUBFAMILY K 160 387 IPR003280 GO:0005267|GO:0016020|GO:0071805
Accr5g01224 411 Gene3D - 322 411 - -
Accr5g01224 411 ProSiteProfiles EF-hand calcium-binding domain profile. 383 411 IPR002048 GO:0005509
Accr5g01224 411 ProSitePatterns EF-hand calcium-binding domain. 357 369 IPR018247 -
Accr5g01224 411 Pfam Ion channel 133 213 IPR013099 -
Accr5g01224 411 Pfam Ion channel 259 328 IPR013099 -
Accr5g01224 411 SUPERFAMILY EF-hand 344 409 IPR011992 -
Accr5g01224 411 PRINTS Two pore domain K+ channel signature 170 198 IPR003280 GO:0005267|GO:0016020|GO:0071805
Accr5g01224 411 PRINTS Two pore domain K+ channel signature 291 300 IPR003280 GO:0005267|GO:0016020|GO:0071805
Accr5g01224 411 SUPERFAMILY Voltage-gated potassium channels 125 213 - -
Accr5g01224 411 Gene3D - 258 321 - -
Accr5g01224 411 SUPERFAMILY Voltage-gated potassium channels 243 350 - -
Accr5g01224 411 FunFam Two-pore potassium channel 3 236 350 - -
Accr5g01224 411 MobiDBLite consensus disorder prediction 60 96 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Accr5g01224 Accr-Chr5 38070963 38076740 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Accr5g01224 3 411 Ion Channels AT4G18160 62.818 3.37e-178 502
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Accr5g01224 K05389 - gmx:100804249 631.328
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Accr5g01224 5 38070963 38076740 Accr5g01224 5 38070963 38076740 ECH