Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Accr5g01198 ATGGCGGAAGCGCCACCATCGGGCAAGCAGAAAGTTCCCTTTCATAAGCTCTTTACTTTTGCCGACCGTCGCGATGTATTTTTTATGGCCATCGGTACGATCTGTGCGATGGCCAATGGGCTATCACAGCCTCTCATGGTACTGATTTTCGGGAAGGCCATCAACACTTTTGGTTCGACCGATCCATCACGCATTGTGCATGAAGTTTCCAAGGTTGCATTACTCTTCGTTTACCTGGCTATTGGTTGTGGCGTTGCTTCATGTCTCCAGGTGGCTAGTTGGATGATGACAGGAGAAAGGCAAGCCGCAAGGATCCGTGGTTTGTACTTGAAAACAATACTAAGACAGGACATTGCCTTCTTTGACACTGAAACAACCACAGGGGAGGTCATTGGTAGGATGTCTGGTGATACCATTCTCATTCAAGATGCCATGGGAGAAAAGGTTGGGAAGTTTCTGCAACTGGCTACAACTTTTGTTGGTGGTTTTGTGGTTGCCTTTACAACAGGATGGTTACTTTCTCTGGTTTTGCTCTCATGTCTTCCATTTGCTGTCATTGCTGGTGGAATCGCGTCAATGGTTGTCGCAAAAATGTCAAGTCGTGGACAAGTTGCTTACGCAGAAGCAGGAAATGTGGTTGAACAAACTGTTGGGGCCATTAGAACAGTTGCATCTTTCACTGGGGAGAAGAAAGCAGTAGAAAACTATAATAGCAAGTTGAAAGTTGCCTATAAATCAATGGTTAAACAAGGGATGGCCACTGGGTTTGGATTTGGACTTGTTATGTTCGTCATCTTCAGCACCTATGGACTTGCATTGTGGTTTGGAGCCAAACTGATCCGTGAGAGAGGGTATAATGGTGGCGCTGTCCTCACTATAATGATGGCGCTGATGATGGGTGGAATGTCACTCGGACAGACATCGCCATCTCTTAATGCATTTGCAGCAGGTCAAGCTGCTGCATACAAGATGTTTGAGACTATCAAAAGAAGACCAAAAATTGATGCTTATGACACTAATGGGGTTGTATTGGAGGACATCAAGGGAGATATTGAACTCAAAGATGTTTATTTCAGATACCCTGCTAGGCCTGACCTACAGGTTTTTTCTGGATTCTCACTGTGTGTTCCAAGGGGCACAACTACTGCTTTAGTGGGTCAAAGTGGAAGCGGAAAGTCAACTGTAATTAGTTTGTTAGAAAGATTCTATGACCCTGATGCTGGTGAAGTACTTATAGATGGTGTTAATTTGAGGGACTTTAAGCTTAGATGGATAAGAGAAAAGATTGGGCTTGTTAGTCAGGAGCCGATGTTATTTACAGGTACCATAAAAGAAAATATAGCATATGGTAAGGATAATGCAACTGATGAGGAAATAATTACAGCGACAAAGCTTGCCAATGCTGCAAAATTTATTGACAAAATGCCAAAGGGCCTTGATACCTTGGTAGGGGAGCATGGAACTCAACTTTCTGGGGGACAAAAGCAACGGATTGCCATTGCAAGGGCAATTCTGAAGAACCCTAAAATCCTCCTTCTTGATGAAGCCACAAGCGCACTAGATGCTGAATCTGAACGCATTGTTCAAGATGCATTGGTAAATGTCATGTTAAACAGGACTACCGTGATTGTTGCTCATCGTTTGACAACTATTAGAAATGCTGATGACATAGCAGTGGTGTATCAAGGGAAAATAGTGGAAAAAGGAACTCACGACGAGTTAATCCAGAATCCTGATGGTGCTTATTCTCAGCTTGTTCAGCTTCAAGAAGGCGCTGATGAAGCTGAAGAAGGAGAAAAATCTGAAACAGACAAGGCTACTACCAGTTATACAGTCAGAAACAAGTCTTCCTCTGAGATCCGAAAATCATCGTTGAGACTAACTAGCAGAGGTTCATCAGGAAGGAAATCTTCTCGCTCACTCAACCTTGGTCTTTCTAATCGAACTAATCCATATCGTTCTGTAGAAGGTGGTGGTGATCTTGAAAAGACCGAAACTGCTGATGTCAAGCGACAAGAGGTTTCCATTATGCGTCTGGCCTATTTGAACAAACCTGAGATTCCTGTGTTATTGCTTGGATCTATTGCTGCTGTAACACAAGGCCTAATTTTCCCTATATTTGGCCTCTTACTTTCATCAGCTATGACCACGTTATATAAACCACCAGAGCAAATGAAGAAAGAATCCAAGTTTTGGGCAGTTCTTTTTGTGATTTTGGGATTGGCTTCTTTCGTGTCTCTACCATTACAAAATTACTTCTTTGGAGTTGCTGGTGGAAAATTAATAGAACGAATTCGTTCCTTGACATTTGAGAAGATTGTGCACCAAGAAATCAGTTGGTTCGATGATCCTGCAAATTCAAGCGGTGCAGTTGGTGCAAGGTTATCTACAGATTCTTCAACAGTGAGAAGTCTTGTTGGTGACACCTTGGCCCTCGTTGTGCAGAACATAGCAACAATAACAACAGGCCTCCTTATAGCATTTACAGCTAATTGGAGACTCTCTTTAGTGATTCTTGCTGTGTCACCTTTCCTTCTTTTGCAAGGAGTATTTCAAATGAGGTTTCAGAAAGGGTTTAGCGCAGATGCTAAACTGATGTATGAAGAGGCCAGTCAGGTGGCAAATGATGCAGTTAGTAGCATCAGGACTGTTGCATCATTCTGTGCTGAACCAAAGGTCATGGAAATGTATAGGAAGAAAACTGAAGGGCCAGAAAAAGAAGGCATTCGAAGAGGTTTTGTTAGTGGTGCAGGTTTTGGTTTCTCCTTCTTTGCTTTGCACTGCGCAAATGCCCTGTGTTTCTACGTGGGAGCCATCTTTATAAAGCAAGGGTTAGCAAATTTTGAAGAGGTTTTCAAGGTTTTCTTTGCTTTAACAATTACAGCATTAGGGGTTTCCCAGACCAGTGCCTTGGCCCCAGACATCAACAAGGGTAAAGACTCCACAGCTTCAATATTTGAAATTCTGGACAGTAAACCCAATATTGACTCGAGTAGCGATGAGGGCATGACATTAGATTCTGTAAACGGTGATATTGAATTGAGAAATGTCAGCTTCAAATATCCTACAAGGCCTGATGTTCAAATTTTCAGAGATTTGAACTTAACCATATCCTCTGGGAAGACTGTTGCATTGGTTGGAGAAAGTGGAAGTGGAAAATCAACAGTTATTAGCCTCATAGAGAGATTTTACGACCCGGATTCTGGACTCGTACTGCTAGATGGAACCGAGATCAAGAAGCTGAGGCTAAGCTGGCTGAGGCATCAAATGGGATTGGTCAGCCAAGAACCAATTCTTTTCAATGAAACCATCCGAGACAACATAGCTTACGGCAAAACAGGAGGTGCCAATGAGGATGAGATAGTTGCAGCAGCTAAAGCAGGCAACGCATTCCAGTTCATAAGCTCACTTCCAAGGGGTTTTGACACTATGGTTGGCGAAAGAGGCACACAATTGTCAGGAGGCCAAAAGCAGAGGATTGCCATTGCAAGAGCAATGTTGAAAAACCCAAAAATCCTTTTGCTTGATGAGGCAACCAGTGCATTAGATGCAGAATCAGAGCGAGTGGTTCAAGAAGCTTTGGATAGTGTTATGGTGAACAGAACCACAGTGGTGGTAGCTCATAGGCTCTCATCAATTAAAGGTGCTGATGTTATAGCAGTTGTGAAAAATGGAGTGATTGCTGAGAAGGGAAGGCATGAGGCCTTGATGAAGATTGAAGATGGTGTTTACGCTTCCTTGGTTGCTCTCCATATGAGTGCTTCATGA 3768 0.4307 MAEAPPSGKQKVPFHKLFTFADRRDVFFMAIGTICAMANGLSQPLMVLIFGKAINTFGSTDPSRIVHEVSKVALLFVYLAIGCGVASCLQVASWMMTGERQAARIRGLYLKTILRQDIAFFDTETTTGEVIGRMSGDTILIQDAMGEKVGKFLQLATTFVGGFVVAFTTGWLLSLVLLSCLPFAVIAGGIASMVVAKMSSRGQVAYAEAGNVVEQTVGAIRTVASFTGEKKAVENYNSKLKVAYKSMVKQGMATGFGFGLVMFVIFSTYGLALWFGAKLIRERGYNGGAVLTIMMALMMGGMSLGQTSPSLNAFAAGQAAAYKMFETIKRRPKIDAYDTNGVVLEDIKGDIELKDVYFRYPARPDLQVFSGFSLCVPRGTTTALVGQSGSGKSTVISLLERFYDPDAGEVLIDGVNLRDFKLRWIREKIGLVSQEPMLFTGTIKENIAYGKDNATDEEIITATKLANAAKFIDKMPKGLDTLVGEHGTQLSGGQKQRIAIARAILKNPKILLLDEATSALDAESERIVQDALVNVMLNRTTVIVAHRLTTIRNADDIAVVYQGKIVEKGTHDELIQNPDGAYSQLVQLQEGADEAEEGEKSETDKATTSYTVRNKSSSEIRKSSLRLTSRGSSGRKSSRSLNLGLSNRTNPYRSVEGGGDLEKTETADVKRQEVSIMRLAYLNKPEIPVLLLGSIAAVTQGLIFPIFGLLLSSAMTTLYKPPEQMKKESKFWAVLFVILGLASFVSLPLQNYFFGVAGGKLIERIRSLTFEKIVHQEISWFDDPANSSGAVGARLSTDSSTVRSLVGDTLALVVQNIATITTGLLIAFTANWRLSLVILAVSPFLLLQGVFQMRFQKGFSADAKLMYEEASQVANDAVSSIRTVASFCAEPKVMEMYRKKTEGPEKEGIRRGFVSGAGFGFSFFALHCANALCFYVGAIFIKQGLANFEEVFKVFFALTITALGVSQTSALAPDINKGKDSTASIFEILDSKPNIDSSSDEGMTLDSVNGDIELRNVSFKYPTRPDVQIFRDLNLTISSGKTVALVGESGSGKSTVISLIERFYDPDSGLVLLDGTEIKKLRLSWLRHQMGLVSQEPILFNETIRDNIAYGKTGGANEDEIVAAAKAGNAFQFISSLPRGFDTMVGERGTQLSGGQKQRIAIARAMLKNPKILLLDEATSALDAESERVVQEALDSVMVNRTTVVVAHRLSSIKGADVIAVVKNGVIAEKGRHEALMKIEDGVYASLVALHMSAS 1255
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Accr5g01198 1255 Pfam ABC transporter 1031 1180 IPR003439 GO:0005524
Accr5g01198 1255 PANTHER ABC TRANSPORTER B FAMILY 9 590 IPR039421 -
Accr5g01198 1255 ProSiteProfiles ATP-binding cassette, ABC transporter-type domain profile. 1012 1249 IPR003439 GO:0005524
Accr5g01198 1255 FunFam ABC transporter B family member 1 1002 1252 - -
Accr5g01198 1255 CDD ABC_6TM_Pgp_ABCB1_D1_like 29 312 - -
Accr5g01198 1255 MobiDBLite consensus disorder prediction 607 653 - -
Accr5g01198 1255 SMART AAA_5 378 564 IPR003593 GO:0016887
Accr5g01198 1255 SMART AAA_5 1039 1232 IPR003593 GO:0016887
Accr5g01198 1255 Pfam ABC transporter transmembrane region 29 300 IPR011527 GO:0005524|GO:0016020|GO:0055085|GO:0140359
Accr5g01198 1255 Pfam ABC transporter transmembrane region 691 963 IPR011527 GO:0005524|GO:0016020|GO:0055085|GO:0140359
Accr5g01198 1255 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 1001 1250 IPR027417 -
Accr5g01198 1255 CDD ABC_MTABC3_MDL1_MDL2 351 589 - -
Accr5g01198 1255 SUPERFAMILY ABC transporter transmembrane region 678 996 IPR036640 GO:0005524|GO:0016020
Accr5g01198 1255 FunFam ABC transporter B family member 1 670 978 - -
Accr5g01198 1255 CDD ABC_MTABC3_MDL1_MDL2 1012 1248 - -
Accr5g01198 1255 ProSitePatterns ABC transporters family signature. 490 504 IPR017871 GO:0005524|GO:0016887
Accr5g01198 1255 Gene3D - 349 602 IPR027417 -
Accr5g01198 1255 CDD ABC_6TM_Pgp_ABCB1_D2_like 680 995 - -
Accr5g01198 1255 FunFam ABC transporter B family member 1 341 590 - -
Accr5g01198 1255 FunFam ABC transporter B family member 9 16 346 - -
Accr5g01198 1255 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 340 589 IPR027417 -
Accr5g01198 1255 Gene3D ABC transporter type 1, transmembrane domain 74 986 IPR036640 GO:0005524|GO:0016020
Accr5g01198 1255 MobiDBLite consensus disorder prediction 589 660 - -
Accr5g01198 1255 Gene3D - 1002 1254 IPR027417 -
Accr5g01198 1255 ProSitePatterns ABC transporters family signature. 1152 1166 IPR017871 GO:0005524|GO:0016887
Accr5g01198 1255 ProSiteProfiles ABC transporter integral membrane type-1 fused domain profile. 30 316 IPR011527 GO:0005524|GO:0016020|GO:0055085|GO:0140359
Accr5g01198 1255 ProSiteProfiles ATP-binding cassette, ABC transporter-type domain profile. 351 587 IPR003439 GO:0005524
Accr5g01198 1255 Pfam ABC transporter 371 518 IPR003439 GO:0005524
Accr5g01198 1255 ProSiteProfiles ABC transporter integral membrane type-1 fused domain profile. 691 977 IPR011527 GO:0005524|GO:0016020|GO:0055085|GO:0140359
Accr5g01198 1255 SUPERFAMILY ABC transporter transmembrane region 15 335 IPR036640 GO:0005524|GO:0016020
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Accr5g01198 Accr-Chr5 37757395 37763430 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Accr5g01198 692 1254 Calmodulin-binding Proteins AT2G36910 42.152 2.92e-133 438
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Accr5g01198 K05658 - qsa:O6P43_032068 1823.91