Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Accr5g01197 ATGGCGGAAGCGCCACCATCGGGCAAGCAGAAAGTTCCCTTTCATAAGCTCTTTACTTTTGCCGACCGTCGCGATGTATTTTTTATGGCCATCGGTACGATCTGTGCGATGGCCAATGGGCTATCACAGCCTCTCATGGTACTGATTTTCGGGAAGGCCATCAACACTTTTGGTTCGACCGATCCATCACGCATTGTGCATGAAGTTTCCAAGGTTGCATTACTCTTCGTTTACCTGGCTATTGGTTGTGGCGTTGCTTCATGTCTCCAGGTGGCTAGTTGGATGATGACAGGAGAAAGGCAAGCCGCAAGGATCCGTGGTTTGTACTTGAAAACAATACTAAGACAGGACATTGCCTTCTTTGACACTGAAACAACCACAGGGGAGGTCATTGGTAGGATGTCTGGTGATACCATTCTCATTCAAGATGCCATGGGAGAAAAGGTAAACCTTCCTTTCCTTTCTCGTATGGATATCACCATAATCAATTACCTTGATCCTGCAAGCATCGCAGTAATTTTTTCTTCTATTATTAGTGGCCTGATTCACATAGAACTCATAGAAAGTTTACAACAGGTTGGGAAGTTTCTGCAACTGGCTACAACTTTTGTTGGTGGTTTTGTGGTTGCCTTTACAACAGGATGGTTACTTTCTCTGGTTTTGCTCTCATGTCTTCCATTTGCTGTCATTGCTGGTGGAATCGCGTCAATGGTTGTCGCAAAAATGTCAAGTCGTGGACAAGTTGCTTACGCAGAAGCAGGAAATGTGGTTGAACAAACTGTTGGGGCCATTAGAACAGTTGCATCTTTCACTGGGGAGAAGAAAGCAGTAGAAAACTATAATAGCAAGTTGAAAGTTGCCTATAAATCAATGGTTAAACAAGGGATGGCCACTGGGTTTGGATTTGGACTTGTTATGTTCGTCATCTTCAGCACCTATGGACTTGCATTGTGGTTTGGAGCCAAACTGATCCGTGAGAGAGGGTATAATGGTGGCGCTGTCCTCACTATAATGATGGCGCTGATGATGGGTGGAATGTCACTCGGACAGACATCGCCATCTCTTAATGCATTTGCAGCAGGTCAAGCTGCTGCATACAAGATGTTTGAGACTATCAAAAGAAGACCAAAAATTGATGCTTATGACACTAATGGGGTTGTATTGGAGGACATCAAGGGAGATATTGAACTCAAAGATGTTTATTTCAGATACCCTGCTAGGCCTGACCTACAGGTTTTTTCTGGATTCTCACTGTGTGTTCCAAGGGGCACAACTACTGCTTTAGTGGGTCAAAGTGGAAGCGGAAAGTCAACTGTAATTAGTTTGTTAGAAAGATTCTATGACCCTGATGCTGGTGAAGTACTTATAGATGGTGTTAATTTGAGGGACTTTAAGCTTAGATGGATAAGAGAAAAGATTGGGCTTGTTAGTCAGGAGCCGATGTTATTTACAGGTACCATAAAAGAAAATATAGCATATGGTAAGGATAATGCAACTGATGAGGAAATAATTACAGCGACAAAGCTTGCCAATGCTGCAAAATTTATTGACAAAATGCCAAAGGGCCTTGATACCTTGGTAGGGGAGCATGGAACTCAACTTTCTGGGGGACAAAAGCAACGGATTGCCATTGCAAGGGCAATTCTGAAGAACCCTAAAATCCTCCTTCTTGATGAAGCCACAAGCGCACTAGATGCTGAATCTGAACGCATTGTTCAAGATGCATTGGTAAATGTCATGTTAAACAGGACTACCGTGATTGTTGCTCATCGTTTGACAACTATTAGAAATGCTGATGACATAGCAGTGGTGTATCAAGGGAAAATAGTGGAAAAAGGAACTCACGACGAGTTAATCCAGAATCCTGATGGTGCTTATTCTCAGCTTGTTCAGCTTCAAGAAGGCGCTGATGAAGCTGAAGAAGGAGAAAAATCTGAAACAGACAAGGCTACTACCAGTTATACAGTCAGAAACAAGTCTTCCTCTGAGATCCGAAAATCATCGTTGAGACTAACTAGCAGAGGTTCATCAGGAAGGAAATCTTCTCGCTCACTCAACCTTGGTCTTTCTAATCGAACTAATCCATATCGTTCTGTAGAAGGTGGTGGTGATCTTGAAAAGACCGAAACTGCTGATGTCAAGCGACAAGAGGTTTCCATTATGCGTCTGGCCTATTTGAACAAACCTGAGATTCCTGTGTTATTGCTTGGATCTATTGCTGCTGTAACACAAGGCCTAATTTTCCCTATATTTGGCCTCTTACTTTCATCAGCTATGACCACGTTATATAAACCACCAGAGCAAATGAAGAAAGAATCCAAGTTTTGGGCAGTTCTTTTTGTGATTTTGGGATTGGCTTCTTTCGTGTCTCTACCATTACAAAATTACTTCTTTGGAGTTGCTGGTGGAAAATTAATAGAACGAATTCGTTCCTTGACATTTGAGAAGATTGTGCACCAAGAAATCAGTTGGTTCGATGATCCTGCAAATTCAAGCGGTGCAGTTGGTGCAAGGTTATCTACAGATTCTTCAACAGTGAGAAGTCTTGTTGGTGACACCTTGGCCCTCGTTGTGCAGAACATAGCAACAATAACAACAGGCCTCCTTATAGCATTTACAGCTAATTGGAGACTCTCTTTAGTGATTCTTGCTGTGTCACCTTTCCTTCTTTTGCAAGGAGTATTTCAAATGAGGTTTCAGAAAGGGTTTAGCGCAGATGCTAAACTGATGTATGAAGAGGCCAGTCAGGTGGCAAATGATGCAGTTAGTAGCATCAGGACTGTTGCATCATTCTGTGCTGAACCAAAGGTCATGGAAATGTATAGGAAGAAAACTGAAGGGCCAGAAAAAGAAGGCATTCGAAGAGGTTTTGTTAGTGGTGCAGGTTTTGGTTTCTCCTTCTTTGCTTTGCACTGCGCAAATGCCCTGTGTTTCTACGTGGGAGCCATCTTTATAAAGCAAGGGTTAGCAAATTTTGAAGAGGTTTTCAAGGTTTTCTTTGCTTTAACAATTACAGCATTAGGGGTTTCCCAGACCAGTGCCTTGGCCCCAGACATCAACAAGGGTAAAGACTCCACAGCTTCAATATTTGAAATTCTGGACAGTAAACCCAATATTGACTCGAGTAGCGATGAGGGCATGACATTAGATTCTGTAAACGGTGATATTGAATTGAGAAATGTCAGCTTCAAATATCCTACAAGGCCTGATGTTCAAATTTTCAGAGATTTGAACTTAACCATATCCTCTGGGAAGACTGTTGCATTGGTTGGAGAAAGTGGAAGTGGAAAATCAACAGTTATTAGCCTCATAGAGAGATTTTACGACCCGGATTCTGGACTCGTACTGCTAGATGGAACCGAGATCAAGAAGCTGAGGCTAAGCTGGCTGAGGCATCAAATGGGATTGGTCAGCCAAGAACCAATTCTTTTCAATGAAACCATCCGAGACAACATAGCTTACGGCAAAACAGGAGGTGCCAATGAGGATGAGATAGTTGCAGCAGCTAAAGCAGGCAACGCATTCCAGTTCATAAGCTCACTTCCAAGGGGTTTTGACACTATGGTTGGCGAAAGAGGCACACAATTGTCAGGAGGCCAAAAGCAGAGGATTGCCATTGCAAGAGCAATGTTGAAAAACCCAAAAATCCTTTTGCTTGATGAGGCAACCAGTGCATTAGATGCAGAATCAGAGCGAGTGGTTCAAGAAGCTTTGGATAGTGTTATGGTGAACAGAACCACAGTGGTGGTAGCTCATAGGCTCTCATCAATTAAAGGTGCTGATGTTATAGCAGTTGTGAAAAATGGAGTGATTGCTGAGAAGGGAAGGCATGAGGCCTTGATGAAGATTGAAGATGGTGTTTACGCTTCCTTGGTTGCTCTCCATATGAGTGCTTCATGA 3900 0.4282 MAEAPPSGKQKVPFHKLFTFADRRDVFFMAIGTICAMANGLSQPLMVLIFGKAINTFGSTDPSRIVHEVSKVALLFVYLAIGCGVASCLQVASWMMTGERQAARIRGLYLKTILRQDIAFFDTETTTGEVIGRMSGDTILIQDAMGEKVNLPFLSRMDITIINYLDPASIAVIFSSIISGLIHIELIESLQQVGKFLQLATTFVGGFVVAFTTGWLLSLVLLSCLPFAVIAGGIASMVVAKMSSRGQVAYAEAGNVVEQTVGAIRTVASFTGEKKAVENYNSKLKVAYKSMVKQGMATGFGFGLVMFVIFSTYGLALWFGAKLIRERGYNGGAVLTIMMALMMGGMSLGQTSPSLNAFAAGQAAAYKMFETIKRRPKIDAYDTNGVVLEDIKGDIELKDVYFRYPARPDLQVFSGFSLCVPRGTTTALVGQSGSGKSTVISLLERFYDPDAGEVLIDGVNLRDFKLRWIREKIGLVSQEPMLFTGTIKENIAYGKDNATDEEIITATKLANAAKFIDKMPKGLDTLVGEHGTQLSGGQKQRIAIARAILKNPKILLLDEATSALDAESERIVQDALVNVMLNRTTVIVAHRLTTIRNADDIAVVYQGKIVEKGTHDELIQNPDGAYSQLVQLQEGADEAEEGEKSETDKATTSYTVRNKSSSEIRKSSLRLTSRGSSGRKSSRSLNLGLSNRTNPYRSVEGGGDLEKTETADVKRQEVSIMRLAYLNKPEIPVLLLGSIAAVTQGLIFPIFGLLLSSAMTTLYKPPEQMKKESKFWAVLFVILGLASFVSLPLQNYFFGVAGGKLIERIRSLTFEKIVHQEISWFDDPANSSGAVGARLSTDSSTVRSLVGDTLALVVQNIATITTGLLIAFTANWRLSLVILAVSPFLLLQGVFQMRFQKGFSADAKLMYEEASQVANDAVSSIRTVASFCAEPKVMEMYRKKTEGPEKEGIRRGFVSGAGFGFSFFALHCANALCFYVGAIFIKQGLANFEEVFKVFFALTITALGVSQTSALAPDINKGKDSTASIFEILDSKPNIDSSSDEGMTLDSVNGDIELRNVSFKYPTRPDVQIFRDLNLTISSGKTVALVGESGSGKSTVISLIERFYDPDSGLVLLDGTEIKKLRLSWLRHQMGLVSQEPILFNETIRDNIAYGKTGGANEDEIVAAAKAGNAFQFISSLPRGFDTMVGERGTQLSGGQKQRIAIARAMLKNPKILLLDEATSALDAESERVVQEALDSVMVNRTTVVVAHRLSSIKGADVIAVVKNGVIAEKGRHEALMKIEDGVYASLVALHMSAS 1299
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Accr5g01197 1299 FunFam ABC transporter B family member 1 1046 1296 - -
Accr5g01197 1299 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 384 633 IPR027417 -
Accr5g01197 1299 MobiDBLite consensus disorder prediction 633 704 - -
Accr5g01197 1299 SUPERFAMILY ABC transporter transmembrane region 191 379 IPR036640 GO:0005524|GO:0016020
Accr5g01197 1299 ProSiteProfiles ATP-binding cassette, ABC transporter-type domain profile. 1056 1293 IPR003439 GO:0005524
Accr5g01197 1299 PANTHER ABC TRANSPORTER B FAMILY 9 634 IPR039421 -
Accr5g01197 1299 Gene3D ABC transporter type 1, transmembrane domain 191 669 IPR036640 GO:0005524|GO:0016020
Accr5g01197 1299 Gene3D - 385 634 IPR027417 -
Accr5g01197 1299 Gene3D - 703 713 IPR027417 -
Accr5g01197 1299 Gene3D - 1046 1295 IPR027417 -
Accr5g01197 1299 ProSiteProfiles ABC transporter integral membrane type-1 fused domain profile. 30 360 IPR011527 GO:0005524|GO:0016020|GO:0055085|GO:0140359
Accr5g01197 1299 FunFam ABC transporter B family member 1 385 634 - -
Accr5g01197 1299 SUPERFAMILY ABC transporter transmembrane region 722 1040 IPR036640 GO:0005524|GO:0016020
Accr5g01197 1299 SUPERFAMILY ABC transporter transmembrane region 16 155 IPR036640 GO:0005524|GO:0016020
Accr5g01197 1299 ProSitePatterns ABC transporters family signature. 534 548 IPR017871 GO:0005524|GO:0016887
Accr5g01197 1299 Pfam ABC transporter transmembrane region 191 344 IPR011527 GO:0005524|GO:0016020|GO:0055085|GO:0140359
Accr5g01197 1299 Pfam ABC transporter transmembrane region 29 155 IPR011527 GO:0005524|GO:0016020|GO:0055085|GO:0140359
Accr5g01197 1299 Pfam ABC transporter transmembrane region 735 1007 IPR011527 GO:0005524|GO:0016020|GO:0055085|GO:0140359
Accr5g01197 1299 SMART AAA_5 422 608 IPR003593 GO:0016887
Accr5g01197 1299 SMART AAA_5 1083 1276 IPR003593 GO:0016887
Accr5g01197 1299 CDD ABC_6TM_Pgp_ABCB1_D2_like 724 1039 - -
Accr5g01197 1299 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 1045 1294 IPR027417 -
Accr5g01197 1299 MobiDBLite consensus disorder prediction 651 697 - -
Accr5g01197 1299 FunFam ABC transporter B family member 1 714 1022 - -
Accr5g01197 1299 Gene3D ABC transporter type 1, transmembrane domain 1023 1045 IPR036640 GO:0005524|GO:0016020
Accr5g01197 1299 Gene3D ABC transporter type 1, transmembrane domain 714 1022 IPR036640 GO:0005524|GO:0016020
Accr5g01197 1299 CDD ABC_6TM_Pgp_ABCB1_D1_like 29 356 - -
Accr5g01197 1299 CDD ABC_MTABC3_MDL1_MDL2 1056 1292 - -
Accr5g01197 1299 CDD ABC_MTABC3_MDL1_MDL2 395 633 - -
Accr5g01197 1299 ProSitePatterns ABC transporters family signature. 1196 1210 IPR017871 GO:0005524|GO:0016887
Accr5g01197 1299 Pfam ABC transporter 1075 1224 IPR003439 GO:0005524
Accr5g01197 1299 Pfam ABC transporter 415 562 IPR003439 GO:0005524
Accr5g01197 1299 ProSiteProfiles ABC transporter integral membrane type-1 fused domain profile. 735 1021 IPR011527 GO:0005524|GO:0016020|GO:0055085|GO:0140359
Accr5g01197 1299 ProSiteProfiles ATP-binding cassette, ABC transporter-type domain profile. 395 631 IPR003439 GO:0005524
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Accr5g01197 Accr-Chr5 37757395 37763430 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Accr5g01197 736 1298 Calmodulin-binding Proteins AT2G36910 42.152 8.14e-133 438