Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Accr5g01177 ATGCAGACTGTAAACTTCTTTGAGCTCTTACTTGTGGCATTAATTTGTTTCAAGTTGCTGGGAATTTCTCATGAGTCAAAGTTACCTCAAGATGAAGTTCACGCTCTTCAAGAAATTACAAGAACAATGGGAGCAAACAATTGGAAGTTTAATGAATCCTGCGGAATTGATACAGTTGGAGTAACACAGGAACACTCTCCTGTATCAGAGATGAGAAGACTAGATTGTGACTGCCGATTTGAAAACAACACAGTCTGCCATGTTGTGAAGATGACTCTCAAGCGCCTTAGCCTCCCTGGCACGCTTCCACCTCAACTGGTCAAGCTATCCTATCTTCGAGAAATAGATTTTGCTTACAATCTCTTTACTGGTACTATTCCGAAGGAATGGGCTTCGATGAATCTAACTTCAATCTCTCTTCTTGTGAACCAATTATCAGGGGAAATTCCTAGGCATCTAGGAAATATCACTACTCTCACATACCTGACGCTTGAAGCAAACCACTTTTCTGGTGTCATTCCTCCTGAGCTTGGGAGTCTAATCAACTTGCAGGCGTTGGTGCTGTCATCCAATCAATTGACCGGGAGCTTACCAGGGACACTTGCTTTGTTGCAGAATTTGACTGACTTTAGGATAAATGATAACAACTTTAATGGGACCATGCCGAACTTTATTCAGAACTGGAAGCTTCTCGAAAGACTAGAAATGCATTCAAGTGGACTAAAGGGACCAATCCCATCAAATATATCACTTTTGGAGAACTTAGTCCAGTTGAGAATCAGCGACATCGATAGTCCTAGTCAAGGTTTTCCTTTGCTGGAAAACATGCCAGACATCGAAACTTTAGTTCTGAGGAACTGTAACCTTACTGGGGAGATACCTTCATACGTCTGGACAATAACGAAGTTGATAACATTGGATGTCAGTTTTAATAAGCTAGTTGGGCGCATTCCACCAGTTATAAATACCAGACGTCTGAGATATATGTACCTTACAGGAAATATGCTAAGCGGAAATGTACCAGAAATCTTGAAGGGTGGAAGTAGCATTGATCTTTCGTACAACAACTTTACTTGGCAAGGTCCTGAGCAACCTGCTTGTCAGGATAACATGAACTTGAATCTGAATTTGTTCAGAAGCTTTAAAAAGAAGAACAAGTTAGAAGAATATGTTCTTTGCTTAAAGAATTTCAGTTGTCAACGGTATTCAACTTGCTTGCACATAAATAGTGGTGGGGTGGATGTAAAGGTGACAGAAAATAAGGGAGAAATCCTTTATTTAGGAGATGGAGATGTTCGTGGTGGTGCAGCAACATATTATTATAGCAAAAGTGATAATTGGGGGTTCAGTAGTACTGGAGACTTCATGGATGATTTTAACTCCCAGAACATAAGATACACAGTATCTCTGCCATCTTCAAATTTGCCTGAACTATATTCAACGGCTCGTAAATCTCCACTTTCACTTACTTATTTCCATAATTGTATGGAAAATGGGAACTACACTGTCAATCTCCACTTTTCTGAAATACAGTTCACAAGTGATAATACATATACAAGTCTTGGGAGGCGCATATTCAATATCTATGTTCAGGAACAATTAAATCGGAAGGATTTTAATATTGAGAGTGAGACAAATGTTGCTCGAAAACCACTGGTACTGCCAATATATAATGTCAGTGTCACAAATCATGTCTTGGAGATTCGGTTCGAATGGGCCGGAAAAGGAACAACTAGAATTCCTGATATAGGAGTTTATGGGCCCATTGTGTCAGCATTGTCTATTGCTTCTGATTCCAGACCTTGCCCAAATAGTGGAGAGAATAGTGCGGTTACTAAGTTTATTGCAATTGGAATCGCTGCTCTATGCATAGTCCTTTTTGTGGCAGGGATCATTTGGTGGAAAGGTTGTTTCAGAGAAAAACTTCAAAAGACAGAAGATATTCAGACAGGAACTTTCAGCATCAAACTGATGAGAGCGGCCACTAATGACTTCTCTTATGATAACAAAATTGGGGAAGGTGGTTTTGGTCCTGTATACAAGGGTCAGTTACCTGATGGTACTGTTATAGCAGTCAAGCAGCTATCATCAATGTCGCGGCAGGGAAATCGTGAATTTCTAAATGAAATAGGCCTAATATCTTGTTTGCATCATCCTAACCTTGTGAAACTCTATGGATCTTGCATTGAAGGGGATCAGCTACTATTGGTATATGAGTACATGGAAAATAATAACCTCGCCCGTGCTTTATTTGGCAATGAAAATAATCAGATTAATCTGGATTGGCCCACAAGAGTTAGGATCTGCATTGGCGTTGCAAAAGGTCTTGCATTCCTTCATGAAGAGTCAAGGCTAAAGATTGTGCACAGAGATATCAAGGCTACTAATGTGTTACTTGATGGCAATTTGGATCCTAAAATATCAGATTTTGGTTTGGCCAAGCTCAATGAAGGAGAGAAGACGCACATGACAACTCGAGTTGCGGGAACTATAGGATATATGGCTCCGGAATATGCATTATGGGGCCATCTAACATATAAGGCAGATGTTTACAGTTTTGGTGTCTTAGCCTTAGAAATTGTTACTGGGAAAAGCAATAACAATTATATGCCAAATGATGGGGCTGTTTGTCTTCTGGAGTGGGCATGTCAGCTGCAACAAAGTGGAAAGTTAATGGAGCTGGTAGATGAGAGAATAGGGTCAAACGTTAGTGAAAGCGAAGCAGAGAAAGTGCTCAAAGTAGCTCTCCTGTGCACAAATGCATCACCATCAATTAGGCCGACAATGTCCAAGGTTGTAAATATGCTTGAAGGAAAAATGGAGATTCCAAATATAGTTCCAGAACCAGGTGCTTACAATGAAGATGTGAGGTTTAAAGCCTTGAGAGATCTTAATAAATGGTCGAGGCAGAGTGTGGATGGAGGCCAGACTCAATCTTCTTCAGCTTCACTCCATACCTTCAGCTTAGAATCTGGCAATACTTTAACTGGTTGTTCTATGGATGATCAGTTAGTCCACAACACTGAGATTTCACCTTCAAAGGGAAGTTCAACACCACCCTGA 3063 0.4039 MQTVNFFELLLVALICFKLLGISHESKLPQDEVHALQEITRTMGANNWKFNESCGIDTVGVTQEHSPVSEMRRLDCDCRFENNTVCHVVKMTLKRLSLPGTLPPQLVKLSYLREIDFAYNLFTGTIPKEWASMNLTSISLLVNQLSGEIPRHLGNITTLTYLTLEANHFSGVIPPELGSLINLQALVLSSNQLTGSLPGTLALLQNLTDFRINDNNFNGTMPNFIQNWKLLERLEMHSSGLKGPIPSNISLLENLVQLRISDIDSPSQGFPLLENMPDIETLVLRNCNLTGEIPSYVWTITKLITLDVSFNKLVGRIPPVINTRRLRYMYLTGNMLSGNVPEILKGGSSIDLSYNNFTWQGPEQPACQDNMNLNLNLFRSFKKKNKLEEYVLCLKNFSCQRYSTCLHINSGGVDVKVTENKGEILYLGDGDVRGGAATYYYSKSDNWGFSSTGDFMDDFNSQNIRYTVSLPSSNLPELYSTARKSPLSLTYFHNCMENGNYTVNLHFSEIQFTSDNTYTSLGRRIFNIYVQEQLNRKDFNIESETNVARKPLVLPIYNVSVTNHVLEIRFEWAGKGTTRIPDIGVYGPIVSALSIASDSRPCPNSGENSAVTKFIAIGIAALCIVLFVAGIIWWKGCFREKLQKTEDIQTGTFSIKLMRAATNDFSYDNKIGEGGFGPVYKGQLPDGTVIAVKQLSSMSRQGNREFLNEIGLISCLHHPNLVKLYGSCIEGDQLLLVYEYMENNNLARALFGNENNQINLDWPTRVRICIGVAKGLAFLHEESRLKIVHRDIKATNVLLDGNLDPKISDFGLAKLNEGEKTHMTTRVAGTIGYMAPEYALWGHLTYKADVYSFGVLALEIVTGKSNNNYMPNDGAVCLLEWACQLQQSGKLMELVDERIGSNVSESEAEKVLKVALLCTNASPSIRPTMSKVVNMLEGKMEIPNIVPEPGAYNEDVRFKALRDLNKWSRQSVDGGQTQSSSASLHTFSLESGNTLTGCSMDDQLVHNTEISPSKGSSTPP 1020
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Accr5g01177 1020 Gene3D - 401 599 - -
Accr5g01177 1020 FunFam Probable LRR receptor-like serine/threonine-protein kinase RFK1 266 386 - -
Accr5g01177 1020 ProSitePatterns Serine/Threonine protein kinases active-site signature. 787 799 IPR008271 GO:0004672|GO:0006468
Accr5g01177 1020 FunFam Putative LRR receptor-like serine/threonine-protein kinase isoform A 198 264 - -
Accr5g01177 1020 Gene3D Ribonuclease Inhibitor 31 196 IPR032675 -
Accr5g01177 1020 Gene3D Ribonuclease Inhibitor 266 387 IPR032675 -
Accr5g01177 1020 Gene3D Ribonuclease Inhibitor 197 265 IPR032675 -
Accr5g01177 1020 Pfam Malectin domain 405 593 IPR021720 -
Accr5g01177 1020 Gene3D Phosphorylase Kinase; domain 1 636 740 - -
Accr5g01177 1020 FunFam Putative leucine-rich repeat receptor-like serine/threonine-protein kinase 403 598 - -
Accr5g01177 1020 FunFam Probable LRR receptor-like serine/threonine-protein kinase RFK1 34 197 - -
Accr5g01177 1020 Pfam Protein tyrosine and serine/threonine kinase 667 936 IPR001245 GO:0004672|GO:0006468
Accr5g01177 1020 PANTHER LEUCINE-RICH REPEAT-CONTAINING PROTEIN DDB_G0281931-RELATED 14 976 - -
Accr5g01177 1020 CDD STKc_IRAK 671 938 - -
Accr5g01177 1020 ProSiteProfiles Protein kinase domain profile. 665 945 IPR000719 GO:0004672|GO:0005524|GO:0006468
Accr5g01177 1020 SUPERFAMILY Protein kinase-like (PK-like) 648 937 IPR011009 -
Accr5g01177 1020 SUPERFAMILY L domain-like 84 358 - -
Accr5g01177 1020 FunFam Putative LRR receptor-like serine/threonine-protein kinase 741 948 - -
Accr5g01177 1020 FunFam probable LRR receptor-like serine/threonine-protein kinase At1g53430 636 740 - -
Accr5g01177 1020 SMART serkin_6 665 933 IPR000719 GO:0004672|GO:0005524|GO:0006468
Accr5g01177 1020 Gene3D Transferase(Phosphotransferase) domain 1 741 945 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Accr5g01177 Accr-Chr5 37392843 37410269 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Accr5g01177 4 831 Receptor kinase-like Gene Family AT1G29750 58.443 0.0 995
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_DLSV Accr5g01177 PK_Tyr_Ser-Thr 6.3e-49 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Accr5g01177 - - qsa:O6P43_032037 1404.42