Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Accr5g01170 ATGGATGAAGCTCAGGGTAGTTCTGGCGCCCTGCCTCCTTTCCTGACAAAGACTTATGAGATGGTGGACGATCCTTCCATAGATTCGATTGTTTCCTGGAGTGCCTCTAACAAAAGTTTCATAGTATGGAATCCTCCAGAATTTGCAAGTGAGTTGCTCCCAAGATTCTTTAAGCACAATAACTTCTCTAGTTTCATCAGACAGCTGAACACATATGGTTTTAGAAAAGTTGATCCAGACCAATGGGAATTTGCAAATGATGATTTCATTAGAGGTCAACCGCATCTTTTGAAGAATATACATAGACGAAAGCCAGTTCATAGTCATTCGTTGCAGAATCAGAATCTCCAAGGACAAGGAACTTCTCCATTAGCAGAACCAGAAAGACACAGTTTAAAAGGCAAAATAGAGTGTCTGAAACATGAAAACGAACGACTTCGTCTAGAGTTAGAGAGTCATGAGCAGGAGTGGAAAGCAAATGAAATTAAAATAGGTTGCTCAAAGGAGAGATTGGGAAAGTTGGAAAGGAAACAACAAAAGATGGTCTCTTCTGTTTCTCAAGCGTTGCAGAAACCTGGAATTGCCTCAAACCTCTTGCAAATGTCAGAAACCCTGTATAGAAAACGAAGGTTGCCTAGAGGTGGTTACTTTTGTGATGAAGTTGTAATTGAAGATGCTACAGAATCTTCTTCAGTGATACCTAGAGATAATGCTGATATAACTTCTGTTTTGTCATCAATTGTGGAGAGAATGGAACAGTTGGGATCATTGCTGTTATTTTGGGAGAACGTTGCTCTTGATTTTAGCGATTCCTTTGTTCATAACCATTCAAATATCGATCTTGATGAATCTACTAGTTGTGTTGATAGTCCTGCTCTCTCTTGTATGCAAGTTGATGACGAATTTCACCCCATGTCATCAGGAATTGACATGAACTCTGAGCCAGCTGGAGCTACTGTTTCTGATCCTGGTTCATCAAAAGAAAAACCTGCGGGAACAACCACTGTAGCAGCTGGAGTCAATGATGTATTCTGGGAACAGTTCTTGACAGAGAATCCTGGTTCTTCAGAAACACATGAAGTACAGTCAGAGCGAAAGGATTCTGATGGCAGAAAGAATGAAGTAAAACCTAGTGAGCGGAGTAAACTTTGGTGGAGCATGAACAATGTAAATAGCCTTTCAGAACAGATGGGGCATCTTAGCCAAACAGAGAAAACTTAA 1221 0.4046 MDEAQGSSGALPPFLTKTYEMVDDPSIDSIVSWSASNKSFIVWNPPEFASELLPRFFKHNNFSSFIRQLNTYGFRKVDPDQWEFANDDFIRGQPHLLKNIHRRKPVHSHSLQNQNLQGQGTSPLAEPERHSLKGKIECLKHENERLRLELESHEQEWKANEIKIGCSKERLGKLERKQQKMVSSVSQALQKPGIASNLLQMSETLYRKRRLPRGGYFCDEVVIEDATESSSVIPRDNADITSVLSSIVERMEQLGSLLLFWENVALDFSDSFVHNHSNIDLDESTSCVDSPALSCMQVDDEFHPMSSGIDMNSEPAGATVSDPGSSKEKPAGTTTVAAGVNDVFWEQFLTENPGSSETHEVQSERKDSDGRKNEVKPSERSKLWWSMNNVNSLSEQMGHLSQTEKT 406
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Accr5g01170 406 Gene3D - 7 104 IPR036388 -
Accr5g01170 406 MobiDBLite consensus disorder prediction 350 383 - -
Accr5g01170 406 ProSitePatterns HSF-type DNA-binding domain signature. 53 77 IPR000232 GO:0003700|GO:0006355|GO:0043565
Accr5g01170 406 MobiDBLite consensus disorder prediction 107 127 - -
Accr5g01170 406 PANTHER HEAT SHOCK TRANSCRIPTION FACTOR 6 261 IPR027725 -
Accr5g01170 406 MobiDBLite consensus disorder prediction 305 332 - -
Accr5g01170 406 SUPERFAMILY "Winged helix" DNA-binding domain 11 103 IPR036390 -
Accr5g01170 406 MobiDBLite consensus disorder prediction 109 124 - -
Accr5g01170 406 PRINTS Heat shock factor (HSF) domain signature 52 64 IPR000232 GO:0003700|GO:0006355|GO:0043565
Accr5g01170 406 PRINTS Heat shock factor (HSF) domain signature 65 77 IPR000232 GO:0003700|GO:0006355|GO:0043565
Accr5g01170 406 PRINTS Heat shock factor (HSF) domain signature 14 37 IPR000232 GO:0003700|GO:0006355|GO:0043565
Accr5g01170 406 Coils Coil 129 163 - -
Accr5g01170 406 Pfam HSF-type DNA-binding 14 103 IPR000232 GO:0003700|GO:0006355|GO:0043565
Accr5g01170 406 MobiDBLite consensus disorder prediction 312 332 - -
Accr5g01170 406 FunFam Heat shock transcription factor 1 7 104 - -
Accr5g01170 406 MobiDBLite consensus disorder prediction 358 379 - -
Accr5g01170 406 SMART hsfneu3 10 103 IPR000232 GO:0003700|GO:0006355|GO:0043565
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Accr5g01170 Accr-Chr5 37343082 37344416 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Accr5g01170 7 406 HSF AT4G18880 51.843 1.88e-118 348
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF HSF Accr5g01170 HSF_DNA-bind 3.6e-32 CL0123
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Accr5g01170 K09419 - gmx:100798004 560.451