Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Accr5g01160 ATGGACAGTAGGTTCAACAACAGCAACCTAAATATCAGCGAACAGGATGACACTGATATAGCTCAAGATAACGCTGCAGAGTCCCCTCCCTCCGCTGTCTTTAATATCGATAGCTTCGTCCCTTCTACGTCTTCCCCTAAAAGAAGCAGGCGGGCAATACAGAAGAGGGTTGTGCAAATTCCAATCAAAGAAGTTGAAGGATCTAGGGTTAAAGGAGAGAGCAATACTCCACCATCTGATTCCTGGGCTTGGAGAAAGTATGGACAAAAACCCATCAAAGGTTCCCCTTACCCCAGAGGATACTATCGATGCAGCAGTTCCAAGGGATGCCCGGCAAGAAAACAAGTGGAAAGGAGCCGCATGGACCCCACGATGATCGTCGTGACCTACGCTTGCGAGCACAATCACCCTTGGCCGGCTTCTCGGAATCACCACCACCACCACAAATCCGCCTCCAACAACAAAGCCATCGTCCCAGCCGAACCCGTCGCCGCGGCCCGGGTCGAACAGGAACCGGAGTCTAAGGAGAAGTTCGCGGAGCTCGGGGATGGCTCATTGATGAGCACGGCGGAGGATGAGTTTGGGTGGTTCGGTGAAATGGAGAGGACGGGAACGACGCCGTCGGCTGTTCTGGAGAGCACAATTCTGACAGGAGACGACACCGACGTAGCCTCAATGTTCCTGCCGATGAGGGAGGAGGACGAGTCGCTGTTTGCGGACCTGGGGGAGCTGCCGGAATGCTCGGTGGTGTTCCGGCGAGTGGGAATGGATAGAGAGGAGGAGAGGCGGCAGCAGCGTGCGGCGGCGTGGTGTGGGACCACAAGTTGA 828 0.5531 MDSRFNNSNLNISEQDDTDIAQDNAAESPPSAVFNIDSFVPSTSSPKRSRRAIQKRVVQIPIKEVEGSRVKGESNTPPSDSWAWRKYGQKPIKGSPYPRGYYRCSSSKGCPARKQVERSRMDPTMIVVTYACEHNHPWPASRNHHHHHKSASNNKAIVPAEPVAAARVEQEPESKEKFAELGDGSLMSTAEDEFGWFGEMERTGTTPSAVLESTILTGDDTDVASMFLPMREEDESLFADLGELPECSVVFRRVGMDREEERRQQRAAAWCGTTS 275
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Accr5g01160 275 PANTHER WRKY TRANSCRIPTION FACTOR 30-RELATED-RELATED 23 249 IPR044810 GO:0003700
Accr5g01160 275 FunFam WRKY transcription factor 65 61 139 - -
Accr5g01160 275 Gene3D WRKY domain 67 140 IPR036576 GO:0003700|GO:0006355|GO:0043565
Accr5g01160 275 SUPERFAMILY WRKY DNA-binding domain 76 139 IPR036576 GO:0003700|GO:0006355|GO:0043565
Accr5g01160 275 ProSiteProfiles WRKY domain profile. 79 139 IPR003657 GO:0003700|GO:0006355|GO:0043565
Accr5g01160 275 MobiDBLite consensus disorder prediction 1 86 - -
Accr5g01160 275 Pfam WRKY DNA -binding domain 80 137 IPR003657 GO:0003700|GO:0006355|GO:0043565
Accr5g01160 275 MobiDBLite consensus disorder prediction 1 48 - -
Accr5g01160 275 SMART WRKY_cls 78 138 IPR003657 GO:0003700|GO:0006355|GO:0043565
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Accr5g01160 Accr-Chr5 37213976 37215295 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Accr5g01160 16 252 WRKY Transcription Factor Family AT1G29280 55.328 4.89e-83 248
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF WRKY Accr5g01160 WRKY 2.3e-25 CL0274
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Accr5g01160 - - qsa:O6P43_012814 355.91