Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Accr5g01155 ATGAAAACACCACCGGGTAACGAAACGAAGTCCGGAAGGACGGCGACGAAGAAGTCATCGTCCAGTAGAGGCCATCACAGGTTCGTCGGTGTTCGTCAGAGGCCGTCGGGAAGATGGGTGGCCGAGATCAAAGACTCGCTTCAGAAGGTCAGGCTTTGGCTCGGAACTTTCGACACCGCAGAAGATGCAGCTCGAGCCTACGACGCCGCCGCACGCGCCTTATGTGGTGCAAATGCTCGCACCAACTTTGAACTGCCCGATCATTCCATTGGCGGCGGCGGTTTTAGGTACGCGCCGGACAACATGGAGCCCTTCTCGTTCGAGGATATCCCAGAGGCTGGTGCTGATTCAGTTAATGGACTTCTTGGTGCTCTCAGAGCCAAATTGTTTGATGACAAGGGAAAGACATCTTCAAAGCCTACTACCTCTATTACTGGGTCTAGTGTGACTTCGAACTCATCAACTACGCGTAATCATTGTGGGAGCACCGAAATATCAATTTCCTCGTCAAATCCCACCAAAGCTAAGAGAGTGAATATTGTTTCAGAACCTGTTGTAGATCCTGAAACGACGACCATGAGGAGCGTGAACTTGGGCTGGTCTAACGATATTCCATGGCAGTCACAGACGAGGACAAATCATGAGGGCTCTGAAAGTGGTTTGCTTGCCGATGCTGTTTGTGGAGGAGCGATTTCGTGGCCTTTTTCTGCGGCGGATCAAGAGCCGGAGTCCATCTTACATGGCGACTTTAGTTCCCCTCCCAAGTTTTGTTCAGATCATGGTTTATCCAGCAACGGTGAGAATGGTCAAATGAAGAATGTGGTGAGCTTACAGATGAATCAAATTGGTGGAACGTCGTCGTCTGATCAGTGCTTGTGGACACCTGAGCAACAACAGTCGTTCGTTAATGACTGTGATAACCAGAACAGTTGGTTTAGTTCCGGTGGCTCTTGGGACCCACTGCTCTATGCCCCGCTTGGTTGA 984 0.5061 MKTPPGNETKSGRTATKKSSSSRGHHRFVGVRQRPSGRWVAEIKDSLQKVRLWLGTFDTAEDAARAYDAAARALCGANARTNFELPDHSIGGGGFRYAPDNMEPFSFEDIPEAGADSVNGLLGALRAKLFDDKGKTSSKPTTSITGSSVTSNSSTTRNHCGSTEISISSSNPTKAKRVNIVSEPVVDPETTTMRSVNLGWSNDIPWQSQTRTNHEGSESGLLADAVCGGAISWPFSAADQEPESILHGDFSSPPKFCSDHGLSSNGENGQMKNVVSLQMNQIGGTSSSDQCLWTPEQQQSFVNDCDNQNSWFSSGGSWDPLLYAPLG 327
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Accr5g01155 327 PRINTS Ethylene responsive element binding protein signature 50 66 IPR001471 GO:0003700|GO:0006355
Accr5g01155 327 PRINTS Ethylene responsive element binding protein signature 28 39 IPR001471 GO:0003700|GO:0006355
Accr5g01155 327 MobiDBLite consensus disorder prediction 132 174 - -
Accr5g01155 327 MobiDBLite consensus disorder prediction 136 174 - -
Accr5g01155 327 ProSiteProfiles AP2/ERF domain profile. 27 84 IPR001471 GO:0003700|GO:0006355
Accr5g01155 327 Pfam AP2 domain 27 76 IPR001471 GO:0003700|GO:0006355
Accr5g01155 327 Gene3D AP2/ERF domain 26 85 IPR036955 GO:0003700|GO:0006355
Accr5g01155 327 MobiDBLite consensus disorder prediction 1 31 - -
Accr5g01155 327 CDD AP2 27 84 IPR001471 GO:0003700|GO:0006355
Accr5g01155 327 SMART rav1_2 27 90 IPR001471 GO:0003700|GO:0006355
Accr5g01155 327 FunFam ethylene-responsive transcription factor RAP2-11 26 85 - -
Accr5g01155 327 MobiDBLite consensus disorder prediction 1 18 - -
Accr5g01155 327 SUPERFAMILY DNA-binding domain 28 84 IPR016177 GO:0003677
Accr5g01155 327 PANTHER SHN SHINE , DNA BINDING / TRANSCRIPTION FACTOR 12 210 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Accr5g01155 Accr-Chr5 37161262 37162245 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Accr5g01155 17 83 AP2-EREBP Transcription Factor Family AT5G19790 67.647 1.06e-24 99.0
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF AP2/ERF-ERF Accr5g01155 AP2 2.1e-13 CL0081