Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Accr5g01142 ATGGATCAGGCAAGAAAGCCAGAGAGTGATGAGGTATCGGATCTCGTTGATGAAGGGACAGGACAGAAAACAACTGATTCGGTTGAAGGGTCTGCCGATGGAGTAGCTGGGGGCAGCTTGAGTGGAGCTATCAAAAGTGGAGATGTGACTTCAGAAGGGATGAGCAATGATCCGGGGCTGAATAAGAAACTACATGAGGCGCCTGCAGGAGCTATGGATCGGGGCATGCGTGATCAGCAAAATACCAGTGATGCATTCCCCGTAGTTGATCAAGGAACAAGTTATAATTCAAGGAATTTGCATAACAGGGCTGTACTTGAGACCGTGGTTGCAATAGATTCTGCTGAGACAGAGGGTGTGAATGGAGATAATAGGAAGTTGGAAGCCAGGGTCAATGAATCGGAGTTGAACAAGGCATCCATGAAATCACCAAAACGGCCGTCTGAAGCGGATAAAAATTCATATGTGATCAACATAAAGTCTGGTAGCTGCAGAGAGTTTAGCGAGAATGTGGAGGGTGAAAGGATTTGTAGGATTTGCCATCTTGCTTCTGGGCAACCATCAGATTCAGCAGCTGCTAGCCCTACAAACAGTGCCTCTAATGGAGATTTAATTCAGCTTGGTTGTGCGTGTAAAGATGAGCTGGGTATTGCGCACAGCCATTGTGCTGAGGCATGGTTCAAGCTAAAAGGAAACAGATTGTGTGAAATATGTGGTGAAACTGCCAAAAATGTTTCGGGCGTTGCTGATCATGGATTTATGGAAGAGTGGAATGAAAGAACATTCGTTGACAACCACAGCACCTCATCAACATCATCTGGCATGTGTTGTGGATGCTGGCGTGGACAGCCATTTTGTAACTTCTTGATGGCTTGCCTGGTGATAGCTTTTGTTCTGCCGTGGTTTTTCCGTGTAAATATGTTCTGA 927 0.4595 MDQARKPESDEVSDLVDEGTGQKTTDSVEGSADGVAGGSLSGAIKSGDVTSEGMSNDPGLNKKLHEAPAGAMDRGMRDQQNTSDAFPVVDQGTSYNSRNLHNRAVLETVVAIDSAETEGVNGDNRKLEARVNESELNKASMKSPKRPSEADKNSYVINIKSGSCREFSENVEGERICRICHLASGQPSDSAAASPTNSASNGDLIQLGCACKDELGIAHSHCAEAWFKLKGNRLCEICGETAKNVSGVADHGFMEEWNERTFVDNHSTSSTSSGMCCGCWRGQPFCNFLMACLVIAFVLPWFFRVNMF 308
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Accr5g01142 308 MobiDBLite consensus disorder prediction 1 95 - -
Accr5g01142 308 MobiDBLite consensus disorder prediction 1 17 - -
Accr5g01142 308 Gene3D Zinc/RING finger domain, C3HC4 (zinc finger) 161 249 IPR013083 -
Accr5g01142 308 Pfam RING-variant domain 177 238 IPR011016 GO:0008270
Accr5g01142 308 SUPERFAMILY RING/U-box 174 241 - -
Accr5g01142 308 ProSiteProfiles Zinc finger RING-CH-type profile. 169 245 IPR011016 GO:0008270
Accr5g01142 308 MobiDBLite consensus disorder prediction 119 149 - -
Accr5g01142 308 MobiDBLite consensus disorder prediction 118 151 - -
Accr5g01142 308 SMART ringv_2 176 239 IPR011016 GO:0008270
Accr5g01142 308 PANTHER ZINC FINGER, RING-CH-TYPE 55 308 - -
Accr5g01142 308 MobiDBLite consensus disorder prediction 76 95 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Accr5g01142 Accr-Chr5 37073905 37076829 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Accr5g01142 106 307 C3H Transcription Factor Family AT5G05830 36.232 3.78e-32 117
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Accr5g01142 - - gmx:100791129 353.599
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Accr5g01142 5 37073905 37076829 Accr5g01142 5 37073905 37076829 ECH