Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Accr5g01141 ATGGAAGATGTGAAATGGATTGTTTTTTTCGTCTTCTTTCTCTGGAATTGGTTGGCTGCTGCTGCTGACACTGACAGTCTTCTTTCTCCAAAGGGTGTGAACTATGAAGTTGCTGCTTTGATGTCAATGAAGAATAAAATGAAGGACGAGCTGCGAGTTATGGACGGTTGGGATATTAATTCGGTTGATCCTTGTACTTGGAACATGGTCGGTTGCTCTGCTGTGGGCTATGTTATTTCCCTGGATATGGCCAGTATGGGTTTATCTGGAACGCTTTCTCCAGGAATTGGAAATTTGAGCCACCTCCGAACACTGTTGTTGCAGAACAATCAATTATCTGGACCCGTTCCAGCTGAGATAGGAAAGCTTTTGGAGCTTCAGACTCTTGACGTTTCTGGCAACCAGTTTGATGGTGAAATCCCTAGTTCTCTGGGCTTTTTGACTAATCTTAGCTACTTGCGGCTCAGTAGAAATAAACTATCTGGGCAGATTCCTCAGCTTGTTGCGAATCTCACAGGCCTTTCATTCTTGGACTTGTCATTCAATAATCTCAGTGGTCCCATTCCAAAAATTTTAGCAAAAGGATACAGTATTTCAGGAAACAACTTCCTCTGTGCATCTTCATCAGCACAAATTTGTATGGGTGTTTCAAATCCACTAAATGAAACTGGTTCATCACTGGATGTCAGTAGTCATCACCATCGGGTGCTTTCTGTTGCCATTGGCATTAGTTGTACATTTCTAATATCAATAGTGCTGCTTATCTGCTGTGTGCATTGGTACAGATCGCGCATCTTGTATACATCTTATGTGAAGGAAGATTGTGAATTTGACATTGGTCATTTGAGGAGGTTTTCCTTCCGTGAATTGCAATCTGCTACTAGCAATTTCAGTCCGAAAAATATCCTAGGACAAGGTGGATTTGGTGTTGTCTACAAAGGAAATCTTCCAAATAAAATGACAGTGGCAGTGAAGAGGCTTAAAGATCCCAATTACACTGGAGAAGTACAATTTCAAACTGAAGTTGAGATGATTGGCTTGGCAGTGCATCGGAATCTCCTGCGTCTCTATGGATTTTGTATGACATCTGATGAGAGGCTACTTGTGTACCCATACATGCCTAATGGCAGTGTTGCTGATCGCTTGAGAGACACTTGCCGTGAAAAGCCATCATTGGACTGGAACAGGCGAATGTGTATTGCTCTTGGGGCTGCTCGTGGGCTTCTATATTTACATGAGCAGTGTAATCCAAAAATTATCCACAGGGACGTTAAGGCCGCAAACATTTTGCTGGATGAAAGTTTTGAAGCTGTGGTGGGTGATTTTGGTCTTGCTAAGCTCTTGGATCAAAGAGATTCGCATGTCACTACTGCAGTTCGAGGCACAGTAGGACACATTGCCCCCGAATATCTCTCCACCGGGCAGTCATCTGAAAAAACTGACGTTTTCGGATTTGGCATATTACTTTTGGAGCTCATTACAGGGCAGAAGACTTTGGATGCTGGAAATGGTCAAATCCAGAAGGGAATGATTCTTGATTGGGTTAAAACATTATTTGAGGAAAAGCGATTGGAAGTTCTAGTTGATAGGGATCTGAGGGGACGTTTTGATCCAATAGAGTTGGAACAAGCGGTGAGGCTGTCTTTACAATGTACTCAATCACGTCCCATCCTCCGTCCAAAGATGTCGGAAATCTTAAGGATCCTGGAAGGCCTAGTGGGACAGGAGCAGCCGGAGGATGAATCACACGGTGGAGGTAACGTTTACGACGAAAGAAACTGCAGTTTCTCCAGAAATTACAGTGATGGGCATGATGAACCTTCATTTATTATTGAAGCCATCGAGCTTTCCGGACCCCGGTGA 1863 0.4348 MEDVKWIVFFVFFLWNWLAAAADTDSLLSPKGVNYEVAALMSMKNKMKDELRVMDGWDINSVDPCTWNMVGCSAVGYVISLDMASMGLSGTLSPGIGNLSHLRTLLLQNNQLSGPVPAEIGKLLELQTLDVSGNQFDGEIPSSLGFLTNLSYLRLSRNKLSGQIPQLVANLTGLSFLDLSFNNLSGPIPKILAKGYSISGNNFLCASSSAQICMGVSNPLNETGSSLDVSSHHHRVLSVAIGISCTFLISIVLLICCVHWYRSRILYTSYVKEDCEFDIGHLRRFSFRELQSATSNFSPKNILGQGGFGVVYKGNLPNKMTVAVKRLKDPNYTGEVQFQTEVEMIGLAVHRNLLRLYGFCMTSDERLLVYPYMPNGSVADRLRDTCREKPSLDWNRRMCIALGAARGLLYLHEQCNPKIIHRDVKAANILLDESFEAVVGDFGLAKLLDQRDSHVTTAVRGTVGHIAPEYLSTGQSSEKTDVFGFGILLLELITGQKTLDAGNGQIQKGMILDWVKTLFEEKRLEVLVDRDLRGRFDPIELEQAVRLSLQCTQSRPILRPKMSEILRILEGLVGQEQPEDESHGGGNVYDERNCSFSRNYSDGHDEPSFIIEAIELSGPR 620
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Accr5g01141 620 PANTHER SOMATIC EMBRYOGENESIS RECEPTOR KINASE 1 8 568 - -
Accr5g01141 620 ProSitePatterns Protein kinases ATP-binding region signature. 303 325 IPR017441 GO:0005524
Accr5g01141 620 Pfam Leucine rich repeat N-terminal domain 34 73 IPR013210 -
Accr5g01141 620 Gene3D Ribonuclease Inhibitor 33 215 IPR032675 -
Accr5g01141 620 Pfam Protein kinase domain 300 566 IPR000719 GO:0004672|GO:0005524|GO:0006468
Accr5g01141 620 SUPERFAMILY L domain-like 35 205 - -
Accr5g01141 620 FunFam Putative LRR receptor-like serine/threonine-protein kinase 33 215 - -
Accr5g01141 620 FunFam Somatic embryogenesis receptor-like kinase 1 373 584 - -
Accr5g01141 620 SMART serkin_6 297 568 IPR000719 GO:0004672|GO:0005524|GO:0006468
Accr5g01141 620 Gene3D Transferase(Phosphotransferase) domain 1 373 582 - -
Accr5g01141 620 SUPERFAMILY Protein kinase-like (PK-like) 281 570 IPR011009 -
Accr5g01141 620 Gene3D Phosphorylase Kinase; domain 1 267 372 - -
Accr5g01141 620 FunFam Somatic embryogenesis receptor kinase 1 267 372 - -
Accr5g01141 620 ProSitePatterns Serine/Threonine protein kinases active-site signature. 419 431 IPR008271 GO:0004672|GO:0006468
Accr5g01141 620 ProSiteProfiles Protein kinase domain profile. 297 573 IPR000719 GO:0004672|GO:0005524|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Accr5g01141 Accr-Chr5 37053877 37057419 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Accr5g01141 41 620 Receptor kinase-like Gene Family AT5G45780 72.289 0.0 838
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-II Accr5g01141 Pkinase 4e-43 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Accr5g01141 - - gmx:100810610 1043.49