Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Accr5g01140 ATGTCTGCCTCTGTCAATGGGAACGAGTCACTCACCGGTCACATCATATCTACAACTATTGGAGGCAAAAATGGGGAACCCAAACAGACTATTAGTTACATGGCAGAACGTGTTGTGGGAAATGGATCATTTGGGATTGTTTTCCAGGCAAAATGTTTAGAAACTGGCGAGGCAGTGGCCATTAAGAAGGTTTTACAAGACAGAAGATACAAAAATCGTGAATTACAGTTAATGCGAGTGATGGACCATCCAAATGTGATCTCCTTGAAGCATTGTTTCTTTTCCACTACAAGTACAAATGAGCTATATCTGAATCTGGTGATGGAATATGTTCCCCAGAGCCTGTATCAGGTCATAATGCATTATAGCAATGCTAATCAGAGAATGCCACTTATTTATGTGAAACTTTATATGTACCAGATTTTCAGGGGTTTGGCTTATATCCACACCGTTCCAGGAGTTTGCCACAGAGATTTGAAGCCTCAAAATATACTGGTGGATACTCGTACACATCAAGTTAAGCTATGTGATTTTGGAAGTGCAAAAGTGCTGGTCAGAGGGGAATCTAATATATCATACATATGTTCACGCTTCTATCGAGCTCCAGAACTTATATTTGGTGCCACAGAGTATACTACCTCAATTGACATTTGGTCAGCTGGCTGTGTCCTAGCTGAACTTCTTCTAGGCCAGCCTTTGTTTCCTGGTGGAAGTGCAGTAGACCAGCTTGTGGAGATTATAAAGGTTCTTGGAACACCCACCCGGGAGGAAGTCCGTTGTATGAATCCCAATTATAATGATTTTAGGTTCCCCCAGCTAAAAGCACGCCCTTGGCATAAGATATTCGACAAAAGGATGCCTCCTGAAGCAATTGATCTTGTTTCCCGGCTTCTGCAGTACTCCCCAAGTCTTCGGTGCACTGCGCTAGAAGCATGTGCACATCCTTTCTTTGATGAGCTTCGAGAACCTAATGCACGGCTGTCAAATGGGCGTCCATTACCAGTACTCTTCAACTTTGGACAGGAACTATCTGGAGCATCTCCAGAACTCGTTAATAGGTTGATACCAGACCACGTGAAGCGGCAAATAGGGCTACAATTCACGCATCTGACAGGAACATGA 1122 0.434 MSASVNGNESLTGHIISTTIGGKNGEPKQTISYMAERVVGNGSFGIVFQAKCLETGEAVAIKKVLQDRRYKNRELQLMRVMDHPNVISLKHCFFSTTSTNELYLNLVMEYVPQSLYQVIMHYSNANQRMPLIYVKLYMYQIFRGLAYIHTVPGVCHRDLKPQNILVDTRTHQVKLCDFGSAKVLVRGESNISYICSRFYRAPELIFGATEYTTSIDIWSAGCVLAELLLGQPLFPGGSAVDQLVEIIKVLGTPTREEVRCMNPNYNDFRFPQLKARPWHKIFDKRMPPEAIDLVSRLLQYSPSLRCTALEACAHPFFDELREPNARLSNGRPLPVLFNFGQELSGASPELVNRLIPDHVKRQIGLQFTHLTGT 373
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Accr5g01140 373 ProSiteProfiles Protein kinase domain profile. 33 317 IPR000719 GO:0004672|GO:0005524|GO:0006468
Accr5g01140 373 PANTHER GLYCOGEN SYNTHASE KINASE-3 ALPHA 4 362 - -
Accr5g01140 373 ProSitePatterns Protein kinases ATP-binding region signature. 39 63 IPR017441 GO:0005524
Accr5g01140 373 Pfam Protein kinase domain 33 317 IPR000719 GO:0004672|GO:0005524|GO:0006468
Accr5g01140 373 Gene3D Phosphorylase Kinase; domain 1 18 112 - -
Accr5g01140 373 FunFam Shaggy-related protein kinase kappa 113 360 - -
Accr5g01140 373 SMART serkin_6 33 317 IPR000719 GO:0004672|GO:0005524|GO:0006468
Accr5g01140 373 FunFam Glycogen synthase kinase-3 beta 17 112 - -
Accr5g01140 373 CDD STKc_GSK3 28 320 IPR039192 -
Accr5g01140 373 ProSitePatterns Serine/Threonine protein kinases active-site signature. 154 166 IPR008271 GO:0004672|GO:0006468
Accr5g01140 373 Gene3D Transferase(Phosphotransferase) domain 1 113 360 - -
Accr5g01140 373 SUPERFAMILY Protein kinase-like (PK-like) 32 341 IPR011009 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Accr5g01140 Accr-Chr5 37049374 37052321 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Accr5g01140 39 355 MAP Kinase Gene Family AT2G43790 36.391 6.45e-59 194
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK CMGC_GSK Accr5g01140 Pkinase 4.6e-66 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Accr5g01140 K14502 - gmx:100779909 694.501