Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Accr5g01139 ATGGCCGATGATAAGGAGATGTCTGCCTCTGTCAATGGGAACGAGTCACTCACCGGTCACATCATATCTACAACTATTGGAGGCAAAAATGGGGAACCCAAACAGACTATTAGTTACATGGCAGAACGTGTTGTGGGAAATGGATCATTTGGGATTGTTTTCCAGGCAAAATGTTTAGAAACTGGCGAGGCAGTGGCCATTAAGAAGGTTTTACAAGACAGAAGATACAAAAATCGTGAATTACAGTTAATGCGAGTGATGGACCATCCAAATGTGATCTCCTTGAAGCATTGTTTCTTTTCCACTACAAGTACAAATGAGCTATATCTGAATCTGGTGATGGAATATGTTCCCCAGAGCCTGTATCAGGTCATAATGCATTATAGCAATGCTAATCAGAGAATGCCACTTATTTATGTGAAACTTTATATGTACCAGATTTTCAGGGGTTTGGCTTATATCCACACCGTTCCAGGAGTTTGCCACAGAGATTTGAAGCCTCAAAATATACTGGTGGATACTCGTACACATCAAGTTAAGCTATGTGATTTTGGAAGTGCAAAAGTGCTGGTCAGAGGGGAATCTAATATATCATACATATGTTCACGCTTCTATCGAGCTCCAGAACTTATATTTGGTGCCACAGAGTATACTACCTCAATTGACATTTGGTCAGCTGGCTGTGTCCTAGCTGAACTTCTTCTAGGCCAGCCTTTGTTTCCTGGTGGAAGTGCAGTAGACCAGCTTGTGGAGATTATAAAGGTTCTTGGAACACCCACCCGGGAGGAAGTCCGTTGTATGAATCCCAATTATAATGATTTTAGGTTCCCCCAGCTAAAAGCACGCCCTTGGCATAAGATATTCGACAAAAGGATGCCTCCTGAAGCAATTGATCTTGTTTCCCGGCTTCTGCAGTACTCCCCAAGTCTTCGGTGCACTGCGCTAGAAGCATGTGCACATCCTTTCTTTGATGAGCTTCGAGAACCTAATGCACGGCTGTCAAATGGGCGTCCATTACCAGTACTCTTCAACTTTGGACAGGAACTATCTGGAGCATCTCCAGAACTCGTTAATAGGTTGATACCAGACCACGTGAAGCGGCAAATAGGGCTACAATTCACGCATCTGACAGGAACATGA 1140 0.4351 MADDKEMSASVNGNESLTGHIISTTIGGKNGEPKQTISYMAERVVGNGSFGIVFQAKCLETGEAVAIKKVLQDRRYKNRELQLMRVMDHPNVISLKHCFFSTTSTNELYLNLVMEYVPQSLYQVIMHYSNANQRMPLIYVKLYMYQIFRGLAYIHTVPGVCHRDLKPQNILVDTRTHQVKLCDFGSAKVLVRGESNISYICSRFYRAPELIFGATEYTTSIDIWSAGCVLAELLLGQPLFPGGSAVDQLVEIIKVLGTPTREEVRCMNPNYNDFRFPQLKARPWHKIFDKRMPPEAIDLVSRLLQYSPSLRCTALEACAHPFFDELREPNARLSNGRPLPVLFNFGQELSGASPELVNRLIPDHVKRQIGLQFTHLTGT 379
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Accr5g01139 379 Pfam Protein kinase domain 39 323 IPR000719 GO:0004672|GO:0005524|GO:0006468
Accr5g01139 379 ProSitePatterns Serine/Threonine protein kinases active-site signature. 160 172 IPR008271 GO:0004672|GO:0006468
Accr5g01139 379 Gene3D Transferase(Phosphotransferase) domain 1 119 366 - -
Accr5g01139 379 SMART serkin_6 39 323 IPR000719 GO:0004672|GO:0005524|GO:0006468
Accr5g01139 379 FunFam Glycogen synthase kinase-3 beta 23 118 - -
Accr5g01139 379 FunFam Shaggy-related protein kinase kappa 119 366 - -
Accr5g01139 379 SUPERFAMILY Protein kinase-like (PK-like) 38 347 IPR011009 -
Accr5g01139 379 Gene3D Phosphorylase Kinase; domain 1 24 118 - -
Accr5g01139 379 PANTHER GLYCOGEN SYNTHASE KINASE-3 ALPHA 9 368 - -
Accr5g01139 379 ProSiteProfiles Protein kinase domain profile. 39 323 IPR000719 GO:0004672|GO:0005524|GO:0006468
Accr5g01139 379 CDD STKc_GSK3 34 326 IPR039192 -
Accr5g01139 379 ProSitePatterns Protein kinases ATP-binding region signature. 45 69 IPR017441 GO:0005524
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Accr5g01139 Accr-Chr5 37048539 37052321 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Accr5g01139 45 361 MAP Kinase Gene Family AT2G43790 36.391 8.96e-59 194
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK CMGC_GSK Accr5g01139 Pkinase 4.8e-66 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Accr5g01139 K14502 - gmx:100779909 704.901