Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Accr5g01131 | ATGGCTTCTACTGTTTGGCCTAACAGTGGATCAGGATCAAGTTTCATTGATGGGTTTGTGTTACCAAATGAGCAAGCTTTGAACTGGACACACGCTCAAGTCCCACCATTGTGCTTCAGAAACAGTGTTCCGGGGAAGCATCATGATGGTGGTGGTGGAGATACTGTGGGAAGGAGAATTAAGAAGAAAGGGTCTCGTGTGTCCTTGATCAAAGGACAGTGGACTGATGAAGAAGACAGGAAATTGGTGAGATTGGTGAATCAATATGGTGTGAAGAAATGGGCTCAAATAGCTGAGAAATTGGATGGAAGAGCGGGCAAGCAGTGTAGAGAGAGATGGCATAATCATTTGCGCCCTGATATTAAGAAAGATAGTTGGAGTGAAGAAGAAGAGAGGATACTGGTGGAAACACATGCCAAGGTTGGGAATCGTTGGGCAGAAATAGCAAAAAGCATTCCAGGAAGAACAGAGAACGCAATCAAGAACCATTGGAATGCCACTAAAAGAAGACAGAATTCAAAGAGGAAGAAGAAAATCACACACACAAATCACAAAAGGACACGTCCCTCTATACTTGAAGACTACATCAGAAACAAGACCCTGCTAAAAAATAACACAGCCCAGAAGAACAACATTGCAGAAAACCAATCTGAACGCTCTTCTGAATCTGCTCTTGTTAACGCCAACTCTGTAATAGCTGAACCATTTGATGAGGAATTGCTCTTCTTGCAAGGATTTTTCGCTGACAACCTGAATCACAAACAGTATATTTCTGCTGCTGATGCTGAACACTCTGAGAATTCCTCAACTTGCTTCCCGTTGGACTTTTGTCAAACAGATGGTGAACATCATTTTATCACTGACGTGACTACCACAGGGTCTGGATTTGTGTATTCCATTTCAAACCCAGATAACAAAACAAGCTTCTATGAGAATCTCCTCACTGAGGAGGCCGTCACTCCCATTAAACACTCCCAATCTGATCTTTATCTCTCTCACTTGCTCAACGGACCACCCTCCAATTCATCACTTCTATATGGGTGTGGAAATCATCCAAACCTGAACATGAATTTGCTTATGGGTTATCAGGACAATAGTTCAGAACGAAAGCCAGAGATGGATTTGATGGAATTGGTTTCTTCAAAGTTTTCTCCAAGCACCAACAGTAGTGTTTGA | 1176 | 0.4243 | MASTVWPNSGSGSSFIDGFVLPNEQALNWTHAQVPPLCFRNSVPGKHHDGGGGDTVGRRIKKKGSRVSLIKGQWTDEEDRKLVRLVNQYGVKKWAQIAEKLDGRAGKQCRERWHNHLRPDIKKDSWSEEEERILVETHAKVGNRWAEIAKSIPGRTENAIKNHWNATKRRQNSKRKKKITHTNHKRTRPSILEDYIRNKTLLKNNTAQKNNIAENQSERSSESALVNANSVIAEPFDEELLFLQGFFADNLNHKQYISAADAEHSENSSTCFPLDFCQTDGEHHFITDVTTTGSGFVYSISNPDNKTSFYENLLTEEAVTPIKHSQSDLYLSHLLNGPPSNSSLLYGCGNHPNLNMNLLMGYQDNSSERKPEMDLMELVSSKFSPSTNSSV | 391 |
Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Accr5g01131 | 391 | SMART | sant | 122 | 170 | IPR001005 | - | |
Accr5g01131 | 391 | SMART | sant | 70 | 119 | IPR001005 | - | |
Accr5g01131 | 391 | ProSiteProfiles | Myb-like domain profile. | 118 | 168 | IPR001005 | - | |
Accr5g01131 | 391 | FunFam | Transcriptional activator Myb isoform A | 70 | 123 | - | - | |
Accr5g01131 | 391 | ProSiteProfiles | Myb-like domain profile. | 66 | 117 | IPR001005 | - | |
Accr5g01131 | 391 | PANTHER | MYB PROTEIN-RELATED | 71 | 203 | - | - | |
Accr5g01131 | 391 | Gene3D | - | 125 | 187 | - | - | |
Accr5g01131 | 391 | Pfam | Myb-like DNA-binding domain | 74 | 131 | - | - | |
Accr5g01131 | 391 | CDD | SANT | 74 | 117 | IPR001005 | - | |
Accr5g01131 | 391 | ProSiteProfiles | Myb-type HTH DNA-binding domain profile. | 122 | 172 | IPR017930 | - | |
Accr5g01131 | 391 | SUPERFAMILY | Homeodomain-like | 68 | 164 | IPR009057 | - | |
Accr5g01131 | 391 | CDD | SANT | 125 | 168 | IPR001005 | - | |
Accr5g01131 | 391 | Gene3D | - | 70 | 122 | - | - | |
Accr5g01131 | 391 | ProSiteProfiles | Myb-type HTH DNA-binding domain profile. | 66 | 121 | IPR017930 | - |
Select | Gene | Chromosome | Start | End | Duplicated_type |
---|---|---|---|---|---|
Accr5g01131 | Accr-Chr5 | 36925518 | 36927542 | Tandem |
Select | Gene | Gene_start | Gene_end | Function | Ath_gene | Identity(%) | E-value | Score |
---|---|---|---|---|---|---|---|---|
Accr5g01131 | 62 | 386 | MYB Transcription Factor Family | AT5G58850 | 44.809 | 6.44e-80 | 250 |
Select | Regulatory Factors | Family | Gene | Hmm_acc | Hmm_name | E_value | Clan |
---|---|---|---|---|---|---|---|
TF | MYB | Accr5g01131 | Myb_DNA-bind_6 | 2.9e-19 | CL0123 |
Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Accr5g01131 | K09422 | - | gmx:100786295 | 312.768 |