Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Accr5g01131 ATGGCTTCTACTGTTTGGCCTAACAGTGGATCAGGATCAAGTTTCATTGATGGGTTTGTGTTACCAAATGAGCAAGCTTTGAACTGGACACACGCTCAAGTCCCACCATTGTGCTTCAGAAACAGTGTTCCGGGGAAGCATCATGATGGTGGTGGTGGAGATACTGTGGGAAGGAGAATTAAGAAGAAAGGGTCTCGTGTGTCCTTGATCAAAGGACAGTGGACTGATGAAGAAGACAGGAAATTGGTGAGATTGGTGAATCAATATGGTGTGAAGAAATGGGCTCAAATAGCTGAGAAATTGGATGGAAGAGCGGGCAAGCAGTGTAGAGAGAGATGGCATAATCATTTGCGCCCTGATATTAAGAAAGATAGTTGGAGTGAAGAAGAAGAGAGGATACTGGTGGAAACACATGCCAAGGTTGGGAATCGTTGGGCAGAAATAGCAAAAAGCATTCCAGGAAGAACAGAGAACGCAATCAAGAACCATTGGAATGCCACTAAAAGAAGACAGAATTCAAAGAGGAAGAAGAAAATCACACACACAAATCACAAAAGGACACGTCCCTCTATACTTGAAGACTACATCAGAAACAAGACCCTGCTAAAAAATAACACAGCCCAGAAGAACAACATTGCAGAAAACCAATCTGAACGCTCTTCTGAATCTGCTCTTGTTAACGCCAACTCTGTAATAGCTGAACCATTTGATGAGGAATTGCTCTTCTTGCAAGGATTTTTCGCTGACAACCTGAATCACAAACAGTATATTTCTGCTGCTGATGCTGAACACTCTGAGAATTCCTCAACTTGCTTCCCGTTGGACTTTTGTCAAACAGATGGTGAACATCATTTTATCACTGACGTGACTACCACAGGGTCTGGATTTGTGTATTCCATTTCAAACCCAGATAACAAAACAAGCTTCTATGAGAATCTCCTCACTGAGGAGGCCGTCACTCCCATTAAACACTCCCAATCTGATCTTTATCTCTCTCACTTGCTCAACGGACCACCCTCCAATTCATCACTTCTATATGGGTGTGGAAATCATCCAAACCTGAACATGAATTTGCTTATGGGTTATCAGGACAATAGTTCAGAACGAAAGCCAGAGATGGATTTGATGGAATTGGTTTCTTCAAAGTTTTCTCCAAGCACCAACAGTAGTGTTTGA 1176 0.4243 MASTVWPNSGSGSSFIDGFVLPNEQALNWTHAQVPPLCFRNSVPGKHHDGGGGDTVGRRIKKKGSRVSLIKGQWTDEEDRKLVRLVNQYGVKKWAQIAEKLDGRAGKQCRERWHNHLRPDIKKDSWSEEEERILVETHAKVGNRWAEIAKSIPGRTENAIKNHWNATKRRQNSKRKKKITHTNHKRTRPSILEDYIRNKTLLKNNTAQKNNIAENQSERSSESALVNANSVIAEPFDEELLFLQGFFADNLNHKQYISAADAEHSENSSTCFPLDFCQTDGEHHFITDVTTTGSGFVYSISNPDNKTSFYENLLTEEAVTPIKHSQSDLYLSHLLNGPPSNSSLLYGCGNHPNLNMNLLMGYQDNSSERKPEMDLMELVSSKFSPSTNSSV 391
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Accr5g01131 391 SMART sant 122 170 IPR001005 -
Accr5g01131 391 SMART sant 70 119 IPR001005 -
Accr5g01131 391 ProSiteProfiles Myb-like domain profile. 118 168 IPR001005 -
Accr5g01131 391 FunFam Transcriptional activator Myb isoform A 70 123 - -
Accr5g01131 391 ProSiteProfiles Myb-like domain profile. 66 117 IPR001005 -
Accr5g01131 391 PANTHER MYB PROTEIN-RELATED 71 203 - -
Accr5g01131 391 Gene3D - 125 187 - -
Accr5g01131 391 Pfam Myb-like DNA-binding domain 74 131 - -
Accr5g01131 391 CDD SANT 74 117 IPR001005 -
Accr5g01131 391 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 122 172 IPR017930 -
Accr5g01131 391 SUPERFAMILY Homeodomain-like 68 164 IPR009057 -
Accr5g01131 391 CDD SANT 125 168 IPR001005 -
Accr5g01131 391 Gene3D - 70 122 - -
Accr5g01131 391 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 66 121 IPR017930 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Accr5g01131 Accr-Chr5 36925518 36927542 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Accr5g01131 62 386 MYB Transcription Factor Family AT5G58850 44.809 6.44e-80 250
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF MYB Accr5g01131 Myb_DNA-bind_6 2.9e-19 CL0123
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Accr5g01131 K09422 - gmx:100786295 312.768