Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Accr5g01125 ATGTCGTCACCAGAAGGCTTTCAGATAGAAGACAAGAAGAATAACAGGTGTACTGATCAGGAAGACACTTCATTGGGATCTTCCCATCAGACATGTTCGTCCTTTGACTTGAATGAAGGAGCAAGCATGGAAGAAGAAGAAGACAACAATGGAACAGACTGTGATATGGTCATGGCTGGGGAGGATAATGAAGATGATGATGAGAAAGAGAAGAATAATGAAGAAGAAGGTGATTCCACTAATAATAATAATAGAAGCACGAGGGAAGAAGTGAATGAAAGAAGAAGAACAGTGAGACAGTATGTAAGATCAAAGATGCCTCGCCTTCGATGGACTCCTGAACTTCATCTCTCATTTGTTCAAGCTGTTGAAAGGCTTGGCGGTCAAGAGAGAGCCACACCCAAGTTGGTGCTTCAGCTAATGAATGTGAGAGGGCTCAGCATTGCTCATGTCAAGAGTCACTTGCAGATGTATCGAAGCAAGAAACTTGATGAGACTGGCCAAGTTGTTGGTGGAAACAGATGGAGGCAACAGGAAGGTGTTAATAATTATTCTCAGAGATGGATATCGTCGCATTATTTTCAGTGTGGGAGGCCTCCTCATGAATATTTGAAGATGGGAAACGGCGGAATCATCCTCGCAACTAATTGCAACGACCATACAAAACCAACCGATTCATCATGGCAGCAAATACAGTGGCACTTGGATCGTCAACCTGATCTGAAACTGCAACAGAAAATGTGGCCTCCATTAATGGAGACTACGAACGCTCATCAATGGAACTTGAATCATAATGCCACCTCAAAACCAGATCCACATCACTCTAACTTGAATCATAGTCTGAAGCAGCTAGATTTTCAGCCCCCGTTTCGGATCCAGCTGCGGGAAGAAAAGCAATGGCTGCCTGATTTGCAGTTGGGGCTGAGTCTGGGAGGTGGCAAAGACATCCAAGAAATTAGCACTGAGCTTTCACTTTCTTAG 981 0.4393 MSSPEGFQIEDKKNNRCTDQEDTSLGSSHQTCSSFDLNEGASMEEEEDNNGTDCDMVMAGEDNEDDDEKEKNNEEEGDSTNNNNRSTREEVNERRRTVRQYVRSKMPRLRWTPELHLSFVQAVERLGGQERATPKLVLQLMNVRGLSIAHVKSHLQMYRSKKLDETGQVVGGNRWRQQEGVNNYSQRWISSHYFQCGRPPHEYLKMGNGGIILATNCNDHTKPTDSSWQQIQWHLDRQPDLKLQQKMWPPLMETTNAHQWNLNHNATSKPDPHHSNLNHSLKQLDFQPPFRIQLREEKQWLPDLQLGLSLGGGKDIQEISTELSLS 326
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Accr5g01125 326 Pfam Myb-like DNA-binding domain 109 159 IPR001005 -
Accr5g01125 326 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 103 163 IPR017930 -
Accr5g01125 326 FunFam Myb family transcription factor 105 163 - -
Accr5g01125 326 Gene3D - 106 163 - -
Accr5g01125 326 SUPERFAMILY Homeodomain-like 105 161 IPR009057 -
Accr5g01125 326 MobiDBLite consensus disorder prediction 20 38 - -
Accr5g01125 326 MobiDBLite consensus disorder prediction 40 73 - -
Accr5g01125 326 MobiDBLite consensus disorder prediction 74 96 - -
Accr5g01125 326 MobiDBLite consensus disorder prediction 1 96 - -
Accr5g01125 326 NCBIfam myb-like DNA-binding domain, SHAQKYF class 107 162 IPR006447 GO:0003677
Accr5g01125 326 PANTHER MYB FAMILY TRANSCRIPTION FACTOR PHL7-LIKE 81 249 IPR046955 GO:0003700
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Accr5g01125 Accr-Chr5 36846253 36849066 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Accr5g01125 73 174 G2-like Transcription Factor Family AT2G42660 60.748 1.08e-34 125
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF GARP-G2-like Accr5g01125 Myb_DNA-binding 6.5e-08 CL0123
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Accr5g01125 - - pcin:129307103 327.02
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Accr5g01125 5 36846253 36849066 Accr5g01125 5 36846253 36849066 ECH