Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Accr5g01116 ATGGCCGATGTGAAGAACGGCCAAGATAATCATGAGGGGATAAAGCTGTTTGGGGCTACGATCACGTTGCATCGGGCGAGAAAAGTGGAACAGAATAAGGTGGAGGAGGAGGATCGGACGTCGACGACGCCGGAGAAGAGGCCCGACAAGATCATACCATGTCCAAGATGTAATAGCATGGACACCAAGTTTTGTTACTTCAACAATTATAACGTTAATCAGCCCAGGCATTTCTGTAAGGGGTGTCAGAGGTACTGGACGGCCGGCGGCGCCCTCCGGAACGTGCCTATCGGAGCCGGTAGGAGGAAGGCCAAGCCACCTTTCCGTGGTGCGACTGGATTCTCCGAGGGATGTGGCTACGACGAATCTCTCGTCAGCGACGGCGGCTACCGTCGGTTTGGTTTGGATGAGGGGCTGGGTATTATGGACGAATGGCATGCTACGGTGGCTCAGAGTGGTTTCCGGCACCTTCTGCCGGCGAAACGGCCAAGGAATACTATTCCCGGTCAACCTTTTTAA 519 0.5434 MADVKNGQDNHEGIKLFGATITLHRARKVEQNKVEEEDRTSTTPEKRPDKIIPCPRCNSMDTKFCYFNNYNVNQPRHFCKGCQRYWTAGGALRNVPIGAGRRKAKPPFRGATGFSEGCGYDESLVSDGGYRRFGLDEGLGIMDEWHATVAQSGFRHLLPAKRPRNTIPGQPF 172
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Accr5g01116 172 Pfam Dof domain, zinc finger 50 105 IPR003851 GO:0003677|GO:0006355
Accr5g01116 172 MobiDBLite consensus disorder prediction 30 49 - -
Accr5g01116 172 ProSitePatterns Zinc finger Dof-type signature. 54 90 IPR003851 GO:0003677|GO:0006355
Accr5g01116 172 PANTHER CYCLIC DOF FACTOR 2 32 105 IPR045174 GO:0003700|GO:0006355
Accr5g01116 172 ProSiteProfiles Zinc finger Dof-type profile. 52 106 IPR003851 GO:0003677|GO:0006355
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Accr5g01116 Accr-Chr5 36743685 36744203 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Accr5g01116 10 170 C2C2-Dof Transcription Factor Family AT1G29160 51.977 5.94e-53 164
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF C2C2-Dof Accr5g01116 zf-Dof 2.3e-32 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Accr5g01116 - - qsa:O6P43_012767 211.846
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Accr5g01116 5 36743685 36744203 Accr5g01116 5 36743685 36744203 ECH