Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Accr5g01108 ATGTCGTCTACTCCTCCGTCTTCTTCTAATGGGGTACTATCTTCCATAAAATTTCATGTCCTTGCACGCATCAAAAGGTTTCTCAAACCCAAAGCGGCCCGGGTTAGCTCTGATCCATCTGATAAACTCGACATGTCAATTACCAAAGCCGACAGCAACAACATCGACAAGGTTGAGAATTGTGAATCGGCGATGCAAGCCATGGGGAAACAGAGTTTTGAGGAGGACGAGGAGGAGTCTGTGATATCGTTGAAGAGGTGTGTGAAGAAGCTTCATTTTGGGAGCTGGGAAGAGAAGGAGGTGACGGCTAAAGAGATTGAACGCTTAGCCAAAGAAGATATCAGGGTAAGCAAGCTGATAACAGAGCTCGGAGTGGTGCCGGAGCTGGTGTCAATGGTGGCGTCGGAGGTACCCGGTCGGCGGCTAGCAGGGCTGAAGGCATTGGTTCAGCTCGTTCGTGGAAGTTACAAAATCAAGGCTTTAACAGTGGAAGCAGGTATATTCCCCAAGTTGCCAAAGAGAATTGACCTTGTAGATGAATCAACTAAAAGGGAATGTGCAGAGCTGCTCTTATCATTGTCATCTCTAGCAAACAGCCAATTTCCTATTGCTTCACCAGATTTTCTACCATTCATTAAAGACATTATGGAATCAGATTCAAATTTTGAAACCAAGCAATTATACTTGGGTGCTTTGTGCAACCTCTCAACTGTTATAGAGAATGTGGGGCCTTTGGTTTCTGCTGGGCTTGTGCCAATCCTCTTAGGACTGTCCTCCATTAAAGAGAACTCAGAGAAAGCACTTGCCACTTTGGGGAACTTGGTGGTGACCCTGATGGGGAAAGAGGCAATAGAAAATAGCTTAATGATGCCAGAGAGCTTGATAGAGATTTTGACATGGGAGAATAAACCAAAATGCCAAGAGTTGTCAGCTTATATTCTGATGATTCTAGCTCATCAGAGCTCAACACAGAGAAAGAAGATGGCTCAAGCAGGGATTGTCCCAGTGCTACTTGAAGTGGCTCTCTTGGGAAGCCAATTAGCTCAGAAGAGAGCACTAAAGCTGCTACAATGGTTCAAAGATGAGAGGCAATCAAAGATGGGGCCACATTCTGGGCCACAAACGCCAAGAATGGCAATGGGTTCGCCTATAAACACAATGGAGGCAAAAGAGGGAAAGAGAATGATGAAGAGTTTGGTGAAACAGAGTTTGCATAGGAAGATGGAAATTATTACTCAGAGAGCCAATGCCCCAGGGGACCCTACTAAGTTGAAATCATTGGTTATCAGCACAAGTTCCAAGAGTTTGCCTTACTAA 1317 0.451 MSSTPPSSSNGVLSSIKFHVLARIKRFLKPKAARVSSDPSDKLDMSITKADSNNIDKVENCESAMQAMGKQSFEEDEEESVISLKRCVKKLHFGSWEEKEVTAKEIERLAKEDIRVSKLITELGVVPELVSMVASEVPGRRLAGLKALVQLVRGSYKIKALTVEAGIFPKLPKRIDLVDESTKRECAELLLSLSSLANSQFPIASPDFLPFIKDIMESDSNFETKQLYLGALCNLSTVIENVGPLVSAGLVPILLGLSSIKENSEKALATLGNLVVTLMGKEAIENSLMMPESLIEILTWENKPKCQELSAYILMILAHQSSTQRKKMAQAGIVPVLLEVALLGSQLAQKRALKLLQWFKDERQSKMGPHSGPQTPRMAMGSPINTMEAKEGKRMMKSLVKQSLHRKMEIITQRANAPGDPTKLKSLVISTSSKSLPY 438
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Accr5g01108 438 Gene3D - 48 367 IPR011989 -
Accr5g01108 438 PANTHER ARM REPEAT SUPERFAMILY PROTEIN 9 438 - -
Accr5g01108 438 SUPERFAMILY ARM repeat 83 359 IPR016024 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Accr5g01108 Accr-Chr5 36645289 36647743 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Accr5g01108 97 376 U-box Gene Family AT1G67530 28.571 3.41e-18 85.5
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Accr5g01108 - - gmx:100813828 567.77
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Accr5g01108 5 36645289 36647743 Accr5g01108 5 36645289 36647743 ECH