Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Accr5g01088 ATGGTGCAAATGGTTCAGATCACTGAAACCACTCTCATCCACCCTTCTCGTCCTCCCTTCACCGATGACCATGCCCTCCCTCTCTCTCACCTCGACACCGATCGTAACCTCCACCTCACTTTCCGATACCTTCGTGCTTACGTCAATATCCACCCCTCCTCCTCCGCCGACCCTTTTCTTGTCATCTCTTCCGCCCTCTCCCAAGCTCTCGTTCAATACTACCCACTTGCCGGAAAACTCCGTCGACGCCAACATGAAGACCAGCGACTCGAGATTTGGTGCTCCGCTGGGCAGGGCCTCCCTTTGATTCGGGCTAATGTGGATTTCACGCTTGAGTCCGTGAATTATCTCGATGATCCTGAGTCTCCTTTCCTCGAACAGTTGGTTCCCGATCTGGACATGGACGGGGCGATGGAACACCCTTGTGTTCTGCAAATCACGGTGTTCAAGAACGGTGCGTTCACTCTTGGGGCAGCGATACATCACTCCCTGTGCGACGGGCTCGGCGCGACTCAGTTTTTCAGTGCGGCGGCCGAGTTGGCCCGTGGAGCTACCCAAATATCTCTTGAGCCGATTTGGAACCGTGAAAAGTTGTTGGGTCCTCAGGATCCGATCCGAATTGATTCGCCGGTGATCCGAGAATTTCTGCATTTGGACAAGGGGTTCCTGCCGTACGAACAGAACATTGGTCCAGTCGCGAGAGCCTGCTTTCCTGTGAGAGATGAGTGCTTGGAGAAGTTCAAGCGCTCGCTGTTTGAACAATCTGGATTGAACTTCACCACTTTTGAGGCTTTGGGTGCATACATTTGGAGATCCAAGGTTAAGGCCGCAGGGATTGAAGGTGATGATGAAGAGATAAAGTTCGCATACTCAATCAACATAAGGAAACTGGTGAAGCCGCCGCTTCCAGTAGGCTACTGGGGCAACGGTTGTGTTCCAATGTACGTGAAGATGAGATCAAAGGATGTGATAGAGAAACCCATATGGGAAACGGCAGAACAGATAAAGAAGAGCAAAAGCAATGTGAGTGATGAGTATGTGAGGTCCTTCATTGATTTTCAAGAGAAGCATTATGGGGAGGGGGTCACAGCAGGTAAAGGAGTGAGTGGGTTCACCGATTGGAGACATTTGGGACATTCAAGCGTGGATTTTGGGTGGGGAGGTCCAGTGACTGTGTTGCCTCTTGCAAGGAATCTGCTTGGAAGTGTGGAGCCATGTTTCTTCTTGCCATATTCAACAGCAAGCTCAGGGAAGAAGGATGGCTTCAAGGTTTTGGTAACTTTGGCTGAAGCTGCCTTGCCTGCTTTCAGAGAGGACATGCAATTGTTTTCAAATGGCCACGAAGTTGGACAGTCATCAATATAA 1365 0.5055 MVQMVQITETTLIHPSRPPFTDDHALPLSHLDTDRNLHLTFRYLRAYVNIHPSSSADPFLVISSALSQALVQYYPLAGKLRRRQHEDQRLEIWCSAGQGLPLIRANVDFTLESVNYLDDPESPFLEQLVPDLDMDGAMEHPCVLQITVFKNGAFTLGAAIHHSLCDGLGATQFFSAAAELARGATQISLEPIWNREKLLGPQDPIRIDSPVIREFLHLDKGFLPYEQNIGPVARACFPVRDECLEKFKRSLFEQSGLNFTTFEALGAYIWRSKVKAAGIEGDDEEIKFAYSINIRKLVKPPLPVGYWGNGCVPMYVKMRSKDVIEKPIWETAEQIKKSKSNVSDEYVRSFIDFQEKHYGEGVTAGKGVSGFTDWRHLGHSSVDFGWGGPVTVLPLARNLLGSVEPCFFLPYSTASSGKKDGFKVLVTLAEAALPAFREDMQLFSNGHEVGQSSI 454
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Accr5g01088 454 Pfam Transferase family 4 441 - -
Accr5g01088 454 Gene3D - 2 213 IPR023213 -
Accr5g01088 454 PANTHER ACYL TRANSFERASE 4 4 443 - -
Accr5g01088 454 Gene3D - 226 439 IPR023213 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Accr5g01088 Accr-Chr5 36430502 36432357 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Accr5g01088 5 394 Monolignol Biosynthesis Gene Families AT5G48930 27.981 1.31e-35 135
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Accr5g01088 - - gmx:100817021 669.848
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Accr5g01088 5 36430502 36432357 Accr5g01088 5 36430502 36432357 ECH