Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Accr5g01075 ATGGTTCTGGCCTCCCAGACAGATCTTCCTTTCAACGAGAACGACTCACAAGACATGGTCATATACCAAGTCCTCCACGAGGCCAATTCTCTTCACACCACCACCACCACCTCCTCCTCCTCCTCCTCCTCTGCCGCCGCCGCCACCAACGCCAACGTCGCCGCATTCATCCAGCAGAGGCAACCGCCCGCCTTACAGAGCAGGCTAGAGCCGACCAGGACCGTCGGAAAGAAGCATTACAGAGGCGTGAGGCGGCGGCCGTGGGGGAAGTACGCGGCGGAGATCCGAGACTCTAACCGGCACGGAGCACGCGTATGGCTGGGCACGTTCGAAACCGCGGAGGAGGCAGCCATGGCTTACGACCGAGCGGCTTTTAAAATGAGAGGGTCTAAGGCCTTGCTCAATTTTCCCGCCGAAATCGTAGCTTCTTCCATGGAAATGTCTTTCGATTCTAATCAACCTAGTAATAAGCTGAGCTCCTCAGGAAGATTTTATAATCAAGATTTAGATTCAAGTGCTAGCAGCAGCTCCGGCGTTAATTCCATAGGAACAAACAGCACCTTCTTAGAAACCACGAGTAGCACAGACAGTTAG 594 0.5421 MVLASQTDLPFNENDSQDMVIYQVLHEANSLHTTTTTSSSSSSSAAAATNANVAAFIQQRQPPALQSRLEPTRTVGKKHYRGVRRRPWGKYAAEIRDSNRHGARVWLGTFETAEEAAMAYDRAAFKMRGSKALLNFPAEIVASSMEMSFDSNQPSNKLSSSGRFYNQDLDSSASSSSGVNSIGTNSTFLETTSSTDS 197
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Accr5g01075 197 PRINTS Ethylene responsive element binding protein signature 80 91 IPR001471 GO:0003700|GO:0006355
Accr5g01075 197 PRINTS Ethylene responsive element binding protein signature 103 119 IPR001471 GO:0003700|GO:0006355
Accr5g01075 197 MobiDBLite consensus disorder prediction 169 197 - -
Accr5g01075 197 FunFam Ethylene-responsive transcription factor 2 78 139 - -
Accr5g01075 197 Gene3D AP2/ERF domain 78 139 IPR036955 GO:0003700|GO:0006355
Accr5g01075 197 ProSiteProfiles AP2/ERF domain profile. 79 137 IPR001471 GO:0003700|GO:0006355
Accr5g01075 197 PANTHER DNA-BINDING DOMAIN 18 172 IPR044808 GO:0003700|GO:0009873
Accr5g01075 197 CDD AP2 78 138 IPR001471 GO:0003700|GO:0006355
Accr5g01075 197 SMART rav1_2 79 143 IPR001471 GO:0003700|GO:0006355
Accr5g01075 197 Pfam AP2 domain 79 129 IPR001471 GO:0003700|GO:0006355
Accr5g01075 197 SUPERFAMILY DNA-binding domain 79 139 IPR016177 GO:0003677
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Accr5g01075 Accr-Chr5 36316669 36317262 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Accr5g01075 9 140 AP2-EREBP Transcription Factor Family AT5G47220 52.239 3.29e-40 135
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF AP2/ERF-ERF Accr5g01075 AP2 1.5e-16 CL0081
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Accr5g01075 K13433 - qsu:112020158 188.348
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Accr5g01075 5 36316669 36317262 Accr5g01075 5 36316669 36317262 ECH