Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Accr5g01073 ATGGCTTCTTCAAACCCTAACAGACACTGGCCAAGCATGTTCAAGTCCAAGCCTGCATCTTGCAACTCCCTCCACCACCAATGGAATAAGCATGACAACATCATGTCACCTCCAAGCTGCCACAGAACCTCCTACGCATCAGGAGGTGATCAGGAGGAGAGAAGTGCAGAGCCAAAGCCAAGATGGAACCCAAAACCTGAGCAGATTCGGATACTGGAAGCCATATTCAACTCTGGGATGGTGAACCCTCCAAGAGACGAGATTAGAAAGATCAGAGCTCAACTCCAGCAGTATGGTCAAGTCGGTGATGCCAATGTCTTCTACTGGTTCCAGAACCGTAAATCCAGATCCAAACTCAAGCTGCTTCGTCACCTCCACAACTCTACTTCTAATAATAACTCCTCCCATCAAACCCAAAACCTAAACAACAATTCCTCTCCCAAAGAAATCACGCCACCACCACCACCACAACCTAGTAAGCCATTAATTTCTAATATTGTCTTCTCCGACGACGTCTCTTCTGATACTGCACCTCCCATTTCTTCTACTCCGCCGCCGCCACCAACGCCTCAGCCTTTCTTTTTAATTCCTGTTCCTGTCACACAAGGTTTTTGCTTCTCTGAACTATCAAGTGTGGTTCAACCTCTAGGTCCTCGTGATCATCAACAACAAATCAAAACTGCTGGGTCTTGCACCAGTCTTTTGATTAACGAAATCATGAGCCCTTCACCTTTCAACAAGAATGACGTCCAAGACAAGGTTATACAAATGCAACAACACCCTCCAACCACTCACTCTATTTTCCCTCCCGCCAGGACCACTACTGTTACTGTTTTATCTCCAATAATCTCTCAGATTCAAGGGACGGAAGAGGGTACGATGAAATCGACGGTGTTCATTAACGACGTCGCATTTGAAGTGGGTGTGGGACCCGTCAACGTGAGGGAGGCCTTCGGCGATGACGCGGTGCTCATCCACGTCTCCTCCGGTCAGCCAGTTCTCGTTGACGATTGGGGCATCACCCTCCAGCCTCTTGAGCACGGCGCATCTTATTACCTGATTTAG 1065 0.4817 MASSNPNRHWPSMFKSKPASCNSLHHQWNKHDNIMSPPSCHRTSYASGGDQEERSAEPKPRWNPKPEQIRILEAIFNSGMVNPPRDEIRKIRAQLQQYGQVGDANVFYWFQNRKSRSKLKLLRHLHNSTSNNNSSHQTQNLNNNSSPKEITPPPPPQPSKPLISNIVFSDDVSSDTAPPISSTPPPPPTPQPFFLIPVPVTQGFCFSELSSVVQPLGPRDHQQQIKTAGSCTSLLINEIMSPSPFNKNDVQDKVIQMQQHPPTTHSIFPPARTTTVTVLSPIISQIQGTEEGTMKSTVFINDVAFEVGVGPVNVREAFGDDAVLIHVSSGQPVLVDDWGITLQPLEHGASYYLI 354
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Accr5g01073 354 Gene3D - 59 123 - -
Accr5g01073 354 Pfam Homeodomain 59 118 IPR001356 GO:0003677
Accr5g01073 354 MobiDBLite consensus disorder prediction 162 178 - -
Accr5g01073 354 SUPERFAMILY Homeodomain-like 56 118 IPR009057 -
Accr5g01073 354 MobiDBLite consensus disorder prediction 127 194 - -
Accr5g01073 354 MobiDBLite consensus disorder prediction 1 66 - -
Accr5g01073 354 MobiDBLite consensus disorder prediction 127 147 - -
Accr5g01073 354 CDD homeodomain 58 118 IPR001356 GO:0003677
Accr5g01073 354 ProSiteProfiles 'Homeobox' domain profile. 55 120 IPR001356 GO:0003677
Accr5g01073 354 SMART HOX_1 57 124 IPR001356 GO:0003677
Accr5g01073 354 MobiDBLite consensus disorder prediction 179 194 - -
Accr5g01073 354 PANTHER WUSCHEL-RELATED HOMEOBOX 9 1 354 IPR044557 GO:0003700|GO:0050793
Accr5g01073 354 MobiDBLite consensus disorder prediction 1 50 - -
Accr5g01073 354 FunFam WUSCHEL-related homeobox 11 59 126 - -
Accr5g01073 354 MobiDBLite consensus disorder prediction 52 66 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Accr5g01073 Accr-Chr5 36293501 36295199 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Accr5g01073 1 354 Wox Gene Family AT2G33880 42.025 4.43e-77 240
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF HB-WOX Accr5g01073 Homeodomain 1.9e-14 CL0123
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Accr5g01073 - - pcin:129300954 402.905